Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314B01f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 44 1e-05
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 43 2e-05
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 42 6e-05
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 36 0.004
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 35 0.006
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 35 0.008
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 33 0.034
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 31 0.10
SPAC105.02c |||ankyrin repeat protein, unknown biological role|S... 30 0.24
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 29 0.42
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 28 0.97
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 27 2.2
SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomy... 25 6.8
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 25 9.0
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 44.4 bits (100), Expect = 1e-05
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 336 RDKGGLVPLHNAASYGHLELAALLLRAGTPPNAADRWGFTPLHEA 470
+D G PLH AA+ G +++ L+ P N +D +GFTPLH A
Sbjct: 137 KDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFA 181
Score = 37.1 bits (82), Expect = 0.002
Identities = 24/83 (28%), Positives = 33/83 (39%)
Frame = +3
Query: 213 PQNVNCRDAHGRNSTPLHLAAGYNNXXXXXXXXXXXXXXSARDKGGLVPLHNAASYGHLE 392
P+ + +D G+ TPLH AA + D G PLH A + GH +
Sbjct: 131 PELIRKKDLQGQ--TPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFALAEGHPD 188
Query: 393 LAALLLRAGTPPNAADRWGFTPL 461
+ L+RAG D T L
Sbjct: 189 VGVELVRAGADTLRKDSENHTAL 211
Score = 32.7 bits (71), Expect = 0.034
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 342 KGGLVPLHNAASYGHLELAALLL-RAGTPPNAADRWGFTPLHEAAHKARTQLCALLLA 512
+GG LH AA G L + LL +A D G TPLH AA + Q+ L++
Sbjct: 105 RGGQTCLHYAAGKGRLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLIS 162
Score = 27.9 bits (59), Expect = 0.97
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 3 HEAAAKGKADIVRLLLKHGADPTRRNRDGLTPLQLVRA 116
H AAA GK +V+ L+ A + G TPL A
Sbjct: 146 HRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFALA 183
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 43.2 bits (97), Expect = 2e-05
Identities = 26/99 (26%), Positives = 48/99 (48%)
Frame = +3
Query: 213 PQNVNCRDAHGRNSTPLHLAAGYNNXXXXXXXXXXXXXXSARDKGGLVPLHNAASYGHLE 392
PQ ++ RD +G + + A G+ +A+++ G +H AA GH E
Sbjct: 26 PQELSRRDENGNSGLHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAALNGHAE 85
Query: 393 LAALLLRAGTPPNAADRWGFTPLHEAAHKARTQLCALLL 509
+ LLL AG P+ + + +P++EA + + ++ L L
Sbjct: 86 ICKLLLEAGGDPHIKNIYEKSPIYEADIRNQQKVMDLFL 124
Score = 28.7 bits (61), Expect = 0.56
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 3 HEAAAKGKADIVRLLLKHGADPTRRN 80
H AA G A+I +LLL+ G DP +N
Sbjct: 76 HWAALNGHAEICKLLLEAGGDPHIKN 101
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 41.9 bits (94), Expect = 6e-05
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 330 SARDKGGLVPLHNAASYGHLELAALLLRAGTPPNAADRWGFTPL 461
+A D+ G P+H A SYGH +L +L+ G N D+ G TPL
Sbjct: 31 NAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPL 74
Score = 36.7 bits (81), Expect = 0.002
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 369 AASYGHLELAALLLRAGTPPNAADRWGFTPLHEAAHKARTQLCALLL 509
AAS G ++ L +G PNAAD G+TP+H A + L +L+
Sbjct: 11 AASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILV 57
Score = 33.5 bits (73), Expect = 0.020
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 3 HEAAAKGKADIVRLLLKHGADPTRRNRDGLTPL 101
H A + G +D++++L++ G D R++DG TPL
Sbjct: 42 HAAVSYGHSDLLKILVERGGDINIRDQDGETPL 74
Score = 29.1 bits (62), Expect = 0.42
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 9 AAAKGKADIVRLLLKHGADPTRRNRDGLTPLQ-LVRAGDSD 128
AA+ GK D+V L G P + +G TP+ V G SD
Sbjct: 11 AASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSD 51
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 35.9 bits (79), Expect = 0.004
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3
Query: 357 PLHNAASYGHLELAALLLRAGTPPNAADRWGFTPLHEAAHKARTQLCALLLAHD 518
P+H AA G ++ L++ G P D+ GF LH A H A L LL D
Sbjct: 71 PIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVHAASPLLVVYLLHLD 124
Score = 32.7 bits (71), Expect = 0.034
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 3 HEAAAKGKADIVRLLLKHGADPTRRNRDGLTPLQL 107
H AA +G V L++HGADP +++ G L L
Sbjct: 73 HWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHL 107
Score = 26.2 bits (55), Expect = 3.0
Identities = 23/78 (29%), Positives = 29/78 (37%)
Frame = +3
Query: 231 RDAHGRNSTPLHLAAGYNNXXXXXXXXXXXXXXSARDKGGLVPLHNAASYGHLELAALLL 410
+D G N LHLA + RD PL A+ +G+ + LL
Sbjct: 97 KDKQGFNC--LHLAVHAASPLLVVYLLHLDISVDLRDDQQHTPLMWASYHGNEPITNCLL 154
Query: 411 RAGTPPNAADRWGFTPLH 464
R G A D TPLH
Sbjct: 155 RWGADVLATDEDKMTPLH 172
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 9 AAAKGKADIVRLLLKHGADPTRRNRDGLTPL 101
A+ G I LL+ GAD + D +TPL
Sbjct: 141 ASYHGNEPITNCLLRWGADVLATDEDKMTPL 171
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 35.1 bits (77), Expect = 0.006
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +3
Query: 330 SARDKGGLVPLHNAASYGHLELAALLLRAGTPPNAADRWGFTPL 461
S D G LH A S GH+E+ LLLRA +R TPL
Sbjct: 242 SVIDDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPL 285
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 3 HEAAAKGKADIVRLLLKHGADPTRRNRDGLTPL 101
H A + G ++++LLL+ AD NR TPL
Sbjct: 253 HWACSMGHIEMIKLLLRANADIGVCNRLSQTPL 285
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 34.7 bits (76), Expect = 0.008
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 339 DKGGLVPLHNAASYGHLELAALLLRAGTPPNAADRWGFTPLHEAAHKARTQLCALLLAH 515
++ G LH A+ G + L AG N D G+TPLH A+ +C LL++
Sbjct: 859 NESGRSLLHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSN 917
Score = 31.5 bits (68), Expect = 0.079
Identities = 19/67 (28%), Positives = 25/67 (37%)
Frame = +3
Query: 261 LHLAAGYNNXXXXXXXXXXXXXXSARDKGGLVPLHNAASYGHLELAALLLRAGTPPNAAD 440
LHL A + RD G PLH A+ Y H ++ LL G P+
Sbjct: 866 LHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDVIG 925
Query: 441 RWGFTPL 461
G P+
Sbjct: 926 ASGKKPI 932
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 32.7 bits (71), Expect = 0.034
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 3 HEAAAKGKADIVRLLLKHGADPTRRNRDGLTPLQL 107
H A + A +V LL++GADP N +G TP ++
Sbjct: 438 HYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEI 472
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 357 PLHNAASYGHLELAALLLRAGTPPNAADRWGFTP 458
PLH A + + +L A LLR G P + G TP
Sbjct: 436 PLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTP 469
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 31.1 bits (67), Expect = 0.10
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 339 DKGGLVPLHNAASYGHLELAALLLRAGTPPNAADRW-GFTPLHEAAHKARTQLCALLLA 512
D LH A Y E +LL+ G P+A D +TPL A+ +++ ++L+A
Sbjct: 364 DASSNTALHTAVRYNRPECVKMLLKLGANPSARDFLNSWTPLMLASATGLSEIVSILVA 422
Score = 28.7 bits (61), Expect = 0.56
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 3 HEAAAKGKADIVRLLLKHGADPTRRN-RDGLTPLQLVRA 116
H A + + V++LLK GA+P+ R+ + TPL L A
Sbjct: 372 HTAVRYNRPECVKMLLKLGANPSARDFLNSWTPLMLASA 410
>SPAC105.02c |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 170
Score = 29.9 bits (64), Expect = 0.24
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 33 IVRLLLKHGADPTRRNRDGLTPLQLV 110
+V +L++ GADP N DG P+ LV
Sbjct: 103 MVEMLMEVGADPLLTNNDGFRPIDLV 128
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 29.1 bits (62), Expect = 0.42
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 222 VNCRDAHGRNSTPLHLAAGYN-NXXXXXXXXXXXXXXSARDK-GGLVPLHNAASYGHLEL 395
+N +D +GR T LH+A N N +D+ G LH A G+LE
Sbjct: 45 INQKDRYGR--TVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEA 102
Query: 396 AALLL 410
A+LLL
Sbjct: 103 ASLLL 107
Score = 25.0 bits (52), Expect = 6.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +3
Query: 336 RDKGGLVPLHNAASYGHLELA-ALLLRAGTPPNAADRW-GFTPLHEAAHKARTQLCALLL 509
+D+ G LH A S +LL G D G+T LH A + + +LLL
Sbjct: 48 KDRYGRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAASLLL 107
Query: 510 AHD 518
+ D
Sbjct: 108 SKD 110
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 27.9 bits (59), Expect = 0.97
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 3 HEAAAKGKADIVRLLLKHGADPTRRNRDGLTPL 101
H AAA K +++ L+ GA+P R N G T L
Sbjct: 362 HWAAAVAKMPLLQALIHKGANPLRGNLTGETAL 394
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 2.2
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -1
Query: 233 PAVHVLRSYQFPGSSEVPSLGSVQ*RSITPQRVSRVAVSRSHQLQRRESVPVPPSG 66
P HV ++ F GS +VP + ++ PQ + VS S + R PVPP+G
Sbjct: 37 PYPHV-QNPAFHGSVDVPQVAQ---KAFDPQAAT---VSESANVSRPTPAPVPPAG 85
>SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 386
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 155 SITPQRVSRVAVSRSHQLQRRESVPVPPSGIRPMLEQQSHDI 30
SI PQ V V Q ++SVP SG +P ++ + ++
Sbjct: 123 SILPQEVLPSEVELERTYQDQQSVPDAISGFQPDMDPRLREV 164
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -1
Query: 194 SSEVPSLGSVQ*RSITPQRVSRVAVSRSHQLQRRESVPVPPSGIRPMLEQQSHDIRLA 21
S+ P+ +V + +P +S+ + ++ + + +VP PP P E + D+ LA
Sbjct: 1058 SASKPAPSTVTSAASSPSNISKPSAPVANNVSKPSAVPPPPP--PPPAEVEKKDLYLA 1113
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,551,121
Number of Sequences: 5004
Number of extensions: 23342
Number of successful extensions: 85
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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