Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS314A11f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 23 1.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.2
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 2.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.2
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 22 3.8
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 22 3.8
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 21 8.7
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 23.0 bits (47), Expect = 1.6
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 372 HLQGRSYHISALYVVDLKRFRRIAAGDRLRGQYQALSQDPNSL 500
HLQ ++LY +D FR L + +S+ PN L
Sbjct: 273 HLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDL 315
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 319 LSQNGV*PYGAPPKSNSTNS 260
LS NG P PP S +NS
Sbjct: 116 LSTNGAPPRSTPPLSTPSNS 135
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 319 LSQNGV*PYGAPPKSNSTNS 260
LS NG P PP S +NS
Sbjct: 116 LSTNGAPPRSTPPLSTPSNS 135
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 319 LSQNGV*PYGAPPKSNSTNS 260
LS NG P PP S +NS
Sbjct: 116 LSTNGAPPRSTPPLSTPSNS 135
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 319 LSQNGV*PYGAPPKSNSTNS 260
LS NG P PP S +NS
Sbjct: 116 LSTNGAPPRSTPPLSTPSNS 135
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 319 LSQNGV*PYGAPPKSNSTNS 260
LS NG P PP S +NS
Sbjct: 116 LSTNGAPPRSTPPLSTPSNS 135
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 319 LSQNGV*PYGAPPKSNSTNS 260
LS NG P PP S +NS
Sbjct: 72 LSTNGAPPRSTPPLSTPSNS 91
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 319 LSQNGV*PYGAPPKSNSTNS 260
LS NG P PP S +NS
Sbjct: 116 LSTNGAPPRSTPPLSTPSNS 135
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 319 LSQNGV*PYGAPPKSNSTNS 260
LS NG P PP S +NS
Sbjct: 116 LSTNGAPPRSTPPLSTPSNS 135
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 319 LSQNGV*PYGAPPKSNSTNS 260
LS NG P PP S +NS
Sbjct: 116 LSTNGAPPRSTPPLSTPSNS 135
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 21.8 bits (44), Expect = 3.8
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 238 WSASTKIIFLTCSGNNTSRNRILYPQMVRCR 146
W +T T + SRN YP + CR
Sbjct: 32 WQCNTDEETCTRISSTVSRNTDTYPTLETCR 62
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 21.8 bits (44), Expect = 3.8
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +3
Query: 339 FRFWKQGYWRNHL 377
+ FWK+ YW L
Sbjct: 72 YNFWKKKYWSEFL 84
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 208 TCSGNNTSRNRILYPQMVRCRSRWRCSQRGHWYWTSSYSNPY 83
TC R+R L + R + S+ + Y+ S SNPY
Sbjct: 216 TCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPY 257
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,569
Number of Sequences: 336
Number of extensions: 2369
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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