Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314A11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20554-1|AAA85850.1| 1548|Drosophila melanogaster UDP-glucose:gl...   328   2e-90
AE014296-3071|AAF49220.1| 1548|Drosophila melanogaster CG6850-PA...   328   2e-90
AY119105-1|AAM50965.1|  259|Drosophila melanogaster RE07996p pro...    29   3.8  
AE014296-1939|AAF50073.2|  558|Drosophila melanogaster CG6175-PB...    29   3.8  
BT030445-1|ABP87887.1|  305|Drosophila melanogaster IP08455p pro...    29   5.1  
BT022092-1|AAY33508.1|  310|Drosophila melanogaster AT05319p pro...    29   5.1  
BT003558-1|AAO39562.1|  279|Drosophila melanogaster LP08761p pro...    29   5.1  
AE014297-2322|AAG22154.3|  258|Drosophila melanogaster CG31266-P...    29   5.1  
BT029060-1|ABJ16993.1|  594|Drosophila melanogaster IP07111p pro...    28   8.8  
AY616149-1|AAT40462.1| 1070|Drosophila melanogaster NMDA recepto...    28   8.8  
AY616148-1|AAT40461.1| 1083|Drosophila melanogaster NMDA recepto...    28   8.8  
AY616147-1|AAT40460.1|  902|Drosophila melanogaster NMDA recepto...    28   8.8  
AY616146-1|AAT40459.1|  902|Drosophila melanogaster NMDA recepto...    28   8.8  
AY616145-1|AAT40458.1|  902|Drosophila melanogaster NMDA recepto...    28   8.8  
AY616144-1|AAT40457.1|  902|Drosophila melanogaster NMDA recepto...    28   8.8  
AY050491-1|AAL12479.1|  902|Drosophila melanogaster glutamate NM...    28   8.8  
AY050490-1|AAL12478.1|  902|Drosophila melanogaster glutamate NM...    28   8.8  
AL031027-9|CAA19838.1| 1012|Drosophila melanogaster EG:80H7.7 pr...    28   8.8  
AF381249-1|AAM46167.1|  841|Drosophila melanogaster NMDA recepto...    28   8.8  
AE014298-228|AAF45639.3|  902|Drosophila melanogaster CG33513-PB...    28   8.8  
AE014298-227|AAN09051.2|  902|Drosophila melanogaster CG33513-PA...    28   8.8  
AE014298-226|AAF45640.2| 1083|Drosophila melanogaster CG33513-PC...    28   8.8  

>U20554-1|AAA85850.1| 1548|Drosophila melanogaster
            UDP-glucose:glycoprotein glucosyltransferaseprecursor
            protein.
          Length = 1548

 Score =  328 bits (807), Expect = 2e-90
 Identities = 144/173 (83%), Positives = 158/173 (91%)
 Frame = +3

Query: 3    KSPVKFWFLKNYLSPSLKDILPYMAQEYGFEYELVQYQWPRWLQRQRDRQRTIWGYKILF 182
            KSPVKFWFLKNYLSP   D LP+MA EY F+YELVQY+WPRWL +Q ++QRTIWGYKILF
Sbjct: 1267 KSPVKFWFLKNYLSPQFTDFLPHMASEYNFQYELVQYKWPRWLHQQTEKQRTIWGYKILF 1326

Query: 183  LDVLFPLHVKKIIFVDADQIVRADLKELVELDLGGAPYGYTPFCDSRTEMDGFRFWKQGY 362
            LDVLFPL+V+KIIFVDAD IVR D+KEL ++DLGGAPY YTPFCDSR EM+GFRFWKQGY
Sbjct: 1327 LDVLFPLNVRKIIFVDADAIVRTDIKELYDMDLGGAPYAYTPFCDSRKEMEGFRFWKQGY 1386

Query: 363  WRNHLQGRSYHISALYVVDLKRFRRIAAGDRLRGQYQALSQDPNSLSNLDQDL 521
            WR+HL GR YHISALYVVDLKRFR+IAAGDRLRGQYQALSQDPNSLSNLDQDL
Sbjct: 1387 WRSHLMGRRYHISALYVVDLKRFRKIAAGDRLRGQYQALSQDPNSLSNLDQDL 1439


>AE014296-3071|AAF49220.1| 1548|Drosophila melanogaster CG6850-PA
            protein.
          Length = 1548

 Score =  328 bits (807), Expect = 2e-90
 Identities = 144/173 (83%), Positives = 158/173 (91%)
 Frame = +3

Query: 3    KSPVKFWFLKNYLSPSLKDILPYMAQEYGFEYELVQYQWPRWLQRQRDRQRTIWGYKILF 182
            KSPVKFWFLKNYLSP   D LP+MA EY F+YELVQY+WPRWL +Q ++QRTIWGYKILF
Sbjct: 1267 KSPVKFWFLKNYLSPQFTDFLPHMASEYNFQYELVQYKWPRWLHQQTEKQRTIWGYKILF 1326

Query: 183  LDVLFPLHVKKIIFVDADQIVRADLKELVELDLGGAPYGYTPFCDSRTEMDGFRFWKQGY 362
            LDVLFPL+V+KIIFVDAD IVR D+KEL ++DLGGAPY YTPFCDSR EM+GFRFWKQGY
Sbjct: 1327 LDVLFPLNVRKIIFVDADAIVRTDIKELYDMDLGGAPYAYTPFCDSRKEMEGFRFWKQGY 1386

Query: 363  WRNHLQGRSYHISALYVVDLKRFRRIAAGDRLRGQYQALSQDPNSLSNLDQDL 521
            WR+HL GR YHISALYVVDLKRFR+IAAGDRLRGQYQALSQDPNSLSNLDQDL
Sbjct: 1387 WRSHLMGRRYHISALYVVDLKRFRKIAAGDRLRGQYQALSQDPNSLSNLDQDL 1439


>AY119105-1|AAM50965.1|  259|Drosophila melanogaster RE07996p
           protein.
          Length = 259

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 334 TVSGSGSKATGAITFKVVVITSARCTSWT*NGSAASPP 447
           T +G+G+ +    T    + TS+ C+S + N SAA+PP
Sbjct: 149 TSNGNGNSSNTNNTSLEPIATSSNCSSSSSNNSAATPP 186


>AE014296-1939|AAF50073.2|  558|Drosophila melanogaster CG6175-PB
           protein.
          Length = 558

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 334 TVSGSGSKATGAITFKVVVITSARCTSWT*NGSAASPP 447
           T +G+G+ +    T    + TS+ C+S + N SAA+PP
Sbjct: 448 TSNGNGNSSNTNNTSLEPIATSSNCSSSSSNNSAATPP 485


>BT030445-1|ABP87887.1|  305|Drosophila melanogaster IP08455p
           protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 121 GHWYWTSSYSNPYSWAMYGRISLSE 47
           G+W W +S  N YS+ + G I L E
Sbjct: 84  GNWPWIASIQNAYSYHLCGAIILDE 108


>BT022092-1|AAY33508.1|  310|Drosophila melanogaster AT05319p
           protein.
          Length = 310

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 121 GHWYWTSSYSNPYSWAMYGRISLSE 47
           G+W W +S  N YS+ + G I L E
Sbjct: 147 GNWPWIASIQNAYSYHLCGAIILDE 171


>BT003558-1|AAO39562.1|  279|Drosophila melanogaster LP08761p
           protein.
          Length = 279

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 121 GHWYWTSSYSNPYSWAMYGRISLSE 47
           G+W W +S  N YS+ + G I L E
Sbjct: 58  GNWPWIASIQNAYSYHLCGAIILDE 82


>AE014297-2322|AAG22154.3|  258|Drosophila melanogaster CG31266-PA
           protein.
          Length = 258

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 121 GHWYWTSSYSNPYSWAMYGRISLSE 47
           G+W W +S  N YS+ + G I L E
Sbjct: 37  GNWPWIASIQNAYSYHLCGAIILDE 61


>BT029060-1|ABJ16993.1|  594|Drosophila melanogaster IP07111p
           protein.
          Length = 594

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 569 DLLEKFAEELGFTYELVRVEDGKW 592


>AY616149-1|AAT40462.1| 1070|Drosophila melanogaster NMDA receptor
           subunit 2-3 protein.
          Length = 1070

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 569 DLLEKFAEELGFTYELVRVEDGKW 592


>AY616148-1|AAT40461.1| 1083|Drosophila melanogaster NMDA receptor
           subunit 2-2 protein.
          Length = 1083

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 569 DLLEKFAEELGFTYELVRVEDGKW 592


>AY616147-1|AAT40460.1|  902|Drosophila melanogaster NMDA receptor
           subunit 2-1f protein.
          Length = 902

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 388 DLLEKFAEELGFTYELVRVEDGKW 411


>AY616146-1|AAT40459.1|  902|Drosophila melanogaster NMDA receptor
           subunit 2-1e protein.
          Length = 902

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 388 DLLEKFAEELGFTYELVRVEDGKW 411


>AY616145-1|AAT40458.1|  902|Drosophila melanogaster NMDA receptor
           subunit 2-1d protein.
          Length = 902

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 388 DLLEKFAEELGFTYELVRVEDGKW 411


>AY616144-1|AAT40457.1|  902|Drosophila melanogaster NMDA receptor
           subunit 2-1c protein.
          Length = 902

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 388 DLLEKFAEELGFTYELVRVEDGKW 411


>AY050491-1|AAL12479.1|  902|Drosophila melanogaster glutamate NMDA
           receptor subunitvariant NR2-b protein.
          Length = 902

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 388 DLLEKFAEELGFTYELVRVEDGKW 411


>AY050490-1|AAL12478.1|  902|Drosophila melanogaster glutamate NMDA
           receptor subunitvariant NR2-a protein.
          Length = 902

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 388 DLLEKFAEELGFTYELVRVEDGKW 411


>AL031027-9|CAA19838.1| 1012|Drosophila melanogaster EG:80H7.7
           protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 385 DLLEKFAEELGFTYELVRVEDGKW 408


>AF381249-1|AAM46167.1|  841|Drosophila melanogaster NMDA receptor 2
           protein.
          Length = 841

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 327 DLLEKFAEELGFTYELVRVEDGKW 350


>AE014298-228|AAF45639.3|  902|Drosophila melanogaster CG33513-PB,
           isoform B protein.
          Length = 902

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 388 DLLEKFAEELGFTYELVRVEDGKW 411


>AE014298-227|AAN09051.2|  902|Drosophila melanogaster CG33513-PA,
           isoform A protein.
          Length = 902

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 388 DLLEKFAEELGFTYELVRVEDGKW 411


>AE014298-226|AAF45640.2| 1083|Drosophila melanogaster CG33513-PC,
           isoform C protein.
          Length = 1083

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  DILPYMAQEYGFEYELVQYQWPRW 128
           D+L   A+E GF YELV+ +  +W
Sbjct: 569 DLLEKFAEELGFTYELVRVEDGKW 592


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,470,447
Number of Sequences: 53049
Number of extensions: 469135
Number of successful extensions: 1770
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)