Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314A04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   2.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   2.9  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   3.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   3.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 220 EQIESRFYFQRPHRLCRSTLLACVTS*SPEYSERRQI 330
           EQ+  R  F  PHRL   +   C  + +P    R+ I
Sbjct: 594 EQLTWRRNFHGPHRLAARSRRCCYHAVAPGTDIRQSI 630


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 220 EQIESRFYFQRPHRLCRSTLLACVTS*SPEYSERRQI 330
           EQ+  R  F  PHRL   +   C  + +P    R+ I
Sbjct: 486 EQLTWRRNFHGPHRLAARSRRCCYHAVAPGTDIRQSI 522


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 80  SYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGS 184
           S FA++N       HS  VH+ G         SGS
Sbjct: 60  SVFAANNAEFPEFVHSGMVHNDGTQLMPSPTVSGS 94


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 80  SYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGS 184
           S FA++N       HS  VH+ G         SGS
Sbjct: 60  SVFAANNAEFPEFVHSGMVHNDGTQLMPSPTVSGS 94


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 508 VKLFFCHHFISFC 470
           +KLF  H F  FC
Sbjct: 164 LKLFALHEFYGFC 176


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 316 ERRQIC*DMGYTITQMRGDNPNQR*KHKYSM 408
           ER ++   +G T TQ++    N+R K+K  M
Sbjct: 150 ERAELAASLGLTQTQVKIWFQNRRSKYKKMM 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,136
Number of Sequences: 336
Number of extensions: 2746
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)