Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314A03f
         (335 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   1.7  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   2.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   3.0  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    20   7.0  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 5   VDSEEAEDSPWTCSRPTVSKIL 70
           + + EA   PW C R  V+ ++
Sbjct: 159 ITASEALKHPWICQRERVASVV 180


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 277 VCICNKFSFK 248
           VCIC K SFK
Sbjct: 78  VCICRKTSFK 87


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 255 ALNLQNMFSFVIKQFISWLFFYYTYLM 175
           A+N  N+    +KQF+  L+    Y+M
Sbjct: 214 AVNFMNVMRMKLKQFMPRLYDLLGYVM 240


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 274 CICNKFSFK 248
           CIC K SFK
Sbjct: 79  CICRKTSFK 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,749
Number of Sequences: 438
Number of extensions: 1890
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)