Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314A02f
         (453 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1V0M0 Cluster: DsbA-like protein; n=2; Candidatus Pela...    33   3.8  
UniRef50_Q85KH3 Cluster: NADH dehydrogenase 5; n=1; Schlettereri...    32   5.0  
UniRef50_Q974H5 Cluster: Putative uncharacterized protein ST0682...    32   5.0  
UniRef50_A7FN40 Cluster: Putative uncharacterized protein; n=1; ...    32   6.6  
UniRef50_A2FYV6 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  
UniRef50_A2EZF4 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  
UniRef50_A0E9L6 Cluster: Chromosome undetermined scaffold_84, wh...    31   8.7  

>UniRef50_Q1V0M0 Cluster: DsbA-like protein; n=2; Candidatus
           Pelagibacter ubique|Rep: DsbA-like protein - Candidatus
           Pelagibacter ubique HTCC1002
          Length = 196

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +2

Query: 134 KKTTETVFLIFLFFSQKSIEIQHSLCPYFLAGKQDVKLCELFY 262
           KK T T+F+IFL FS K++   + +      G++  K+  + Y
Sbjct: 2   KKFTSTLFIIFLIFSAKALAADNEMVKRISEGEESAKITIIAY 44


>UniRef50_Q85KH3 Cluster: NADH dehydrogenase 5; n=1; Schlettererius
           cinctipes|Rep: NADH dehydrogenase 5 - Schlettererius
           cinctipes
          Length = 202

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = +3

Query: 183 NLLKYSILYARTFWRGSKML----SYVSCFIYLLKFFFRFKHATIVLF 314
           N+LK+  LY +   +G   L      +  +IYL+K+F +FK+   ++F
Sbjct: 141 NILKFGNLYYKIIEKGWNELYSGQGVIYLYIYLMKYFMKFKYMNFLIF 188


>UniRef50_Q974H5 Cluster: Putative uncharacterized protein ST0682;
           n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
           protein ST0682 - Sulfolobus tokodaii
          Length = 187

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 30/91 (32%), Positives = 41/91 (45%)
 Frame = +3

Query: 54  IGTNTNITYLKDILLSARTDWIENSGLKRPRRLCS*YSFFFLKNLLKYSILYARTFWRGS 233
           I  + N   LK I  + RT+ I+ S LK P R+   Y  F+L N+    +     +   S
Sbjct: 100 INASINEEMLKQITNNVRTELIDVSKLKWPNRITKVY--FYLPNMRAKEV---GAYILQS 154

Query: 234 KMLSYVSCFIYLLKFFFRFKHATIVLFSNNC 326
             LS VS  IY+ K    FK       S+NC
Sbjct: 155 SSLSDVSADIYIAKEKLGFKE-IYDCSSSNC 184


>UniRef50_A7FN40 Cluster: Putative uncharacterized protein; n=1;
           Yersinia pseudotuberculosis IP 31758|Rep: Putative
           uncharacterized protein - Yersinia pseudotuberculosis IP
           31758
          Length = 295

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 231 SKMLSYVSCFIYLLKFFFRFKHATIVLFSNNCDSA*DW 344
           S++ S +  +I++ K  FR KHA I  F+  CDS   W
Sbjct: 117 SQLTSNIGSYIHIFKEIFR-KHAAIACFTTCCDSRLMW 153


>UniRef50_A2FYV6 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1882

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +3

Query: 183 NLLKYSILYARTFWRGSKMLSYVSCFIYLLKFFFRFKHATIVLFSN 320
           NL+K ++LY +T + G +     +  I LL+F F++ + T  L  N
Sbjct: 751 NLVKTAMLYIQTVYTGEESSQDDTVLILLLEFIFKYCNTTCKLVGN 796


>UniRef50_A2EZF4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1248

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +3

Query: 6   FKFRLMQKVVLCRNLPIGTNTNITYLKDILLSARTDWIENSGLKRPRRLCS*YSFFFLKN 185
           F + +++K +   NL     T+I + K        D I N   ++P  + + Y F FL N
Sbjct: 421 FPYLVLEKYITKSNLIKEKETHIEFWK--FFDKNFDKISNDKKEKPALITNNYLFLFLMN 478

Query: 186 LLKY 197
            LKY
Sbjct: 479 CLKY 482


>UniRef50_A0E9L6 Cluster: Chromosome undetermined scaffold_84, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_84, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2830

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +3

Query: 174  FLKNLLKYSILYARTFWRGSKMLSYVSCFIYLLKFFFRFKHA 299
            FL N L Y I YAR  W       Y   F ++    F+F +A
Sbjct: 2433 FLSNTLAYEIHYARMIWELITPFFYTGFFFFIYFVAFKFGYA 2474


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,759,005
Number of Sequences: 1657284
Number of extensions: 6898754
Number of successful extensions: 13816
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13814
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)