Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS314A02f
         (453 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC120952-1|AAI20953.1|  305|Homo sapiens G protein-coupled recep...    31   1.8  
BC120951-1|AAI20952.1|  305|Homo sapiens G protein-coupled recep...    31   1.8  
AY288420-1|AAP72129.1|  305|Homo sapiens G protein-coupled recep...    31   1.8  

>BC120952-1|AAI20953.1|  305|Homo sapiens G protein-coupled receptor
           141 protein.
          Length = 305

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 189 LKYSILYARTFWRGSKMLSYVSCFI--YLLKFFFRFKHATIVLFSNNCDS 332
           L++S+L  + FW   K L ++   +  +L   FFR  +  +V  SN C+S
Sbjct: 211 LRHSLLSHQEFWAQLKNLFFIGVILVCFLPYQFFRIYYLNVVTHSNACNS 260


>BC120951-1|AAI20952.1|  305|Homo sapiens G protein-coupled receptor
           141 protein.
          Length = 305

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 189 LKYSILYARTFWRGSKMLSYVSCFI--YLLKFFFRFKHATIVLFSNNCDS 332
           L++S+L  + FW   K L ++   +  +L   FFR  +  +V  SN C+S
Sbjct: 211 LRHSLLSHQEFWAQLKNLFFIGVILVCFLPYQFFRIYYLNVVTHSNACNS 260


>AY288420-1|AAP72129.1|  305|Homo sapiens G protein-coupled receptor
           141 protein.
          Length = 305

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 189 LKYSILYARTFWRGSKMLSYVSCFI--YLLKFFFRFKHATIVLFSNNCDS 332
           L++S+L  + FW   K L ++   +  +L   FFR  +  +V  SN C+S
Sbjct: 211 LRHSLLSHQEFWAQLKNLFFIGVILVCFLPYQFFRIYYLNVVTHSNACNS 260


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,603,623
Number of Sequences: 237096
Number of extensions: 1112335
Number of successful extensions: 1483
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)