Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313H12f
         (521 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3587| Best HMM Match : No HMM Matches (HMM E-Value=.)              119   2e-27
SB_9847| Best HMM Match : No HMM Matches (HMM E-Value=.)               97   8e-21
SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)           95   2e-20
SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)              75   3e-14
SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)       70   1e-12
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)              68   4e-12
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)           50   1e-06
SB_19115| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   1e-04
SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)                    37   0.009

>SB_3587| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score =  119 bits (286), Expect = 2e-27
 Identities = 51/77 (66%), Positives = 64/77 (83%)
 Frame = -3

Query: 339 FMNYNDLTLICRAHQLVNDGYKYMFDKRLVTVWSAPNYCYRCGNVASILEFNTVHDRTAR 160
           F++ N+L LICRAHQLV++GYKYMFD++LVTVWSAPNYCYRCGN+ASIL F+   +R  +
Sbjct: 1   FVHINNLKLICRAHQLVHEGYKYMFDEKLVTVWSAPNYCYRCGNIASILAFSDADNREPK 60

Query: 159 LFQAVPDTEREVPPQHT 109
           LFQAVPD ER +  Q +
Sbjct: 61  LFQAVPDYERPLANQES 77


>SB_9847| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 97.1 bits (231), Expect = 8e-21
 Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 25/124 (20%)
 Frame = -3

Query: 390 VSPRGAGWLFG-----------------CQVTELFMNY-----NDLTLICRAHQLVNDGY 277
           VSPRGAG+LFG                 C++    +++     ND+ LICRAHQLV +GY
Sbjct: 7   VSPRGAGYLFGSDVVAQTYYLFFFIEWDCEIVYALLDFQYNAANDIDLICRAHQLVMEGY 66

Query: 276 KYMFDKRLVTVWSAPNYCYRCGNVASILEFNTVHDRTARLFQAVPDTEREVPPQHTTP-- 103
           K+ F++ ++TVWSAPNYCYRCGNVA+ILE +    R   +F+A P   R  P     P  
Sbjct: 67  KWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLKREFTIFEAAPQDVRGTPSIAKKPSA 126

Query: 102 -YFL 94
            YFL
Sbjct: 127 DYFL 130


>SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)
          Length = 199

 Score = 95.5 bits (227), Expect = 2e-20
 Identities = 40/69 (57%), Positives = 54/69 (78%)
 Frame = -3

Query: 390 VSPRGAGWLFGCQVTELFMNYNDLTLICRAHQLVNDGYKYMFDKRLVTVWSAPNYCYRCG 211
           +SPRGAG+ FG  ++E F + N LTLI RAHQLV +GY +  D+ +VT++SAPNYCYRCG
Sbjct: 124 ISPRGAGYTFGQDISETFNHTNGLTLITRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCG 183

Query: 210 NVASILEFN 184
           N A+I+E +
Sbjct: 184 NQAAIMELD 192


>SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 204

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 36/90 (40%), Positives = 54/90 (60%)
 Frame = -3

Query: 381 RGAGWLFGCQVTELFMNYNDLTLICRAHQLVNDGYKYMFDKRLVTVWSAPNYCYRCGNVA 202
           RG  + FG  V   F+N +DL LICRAHQ+V DGY++   ++LVT++SAPNYC    N  
Sbjct: 94  RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 153

Query: 201 SILEFNTVHDRTARLFQAVPDTEREVPPQH 112
            ++   +V D     FQ +  +E++   Q+
Sbjct: 154 GMM---SVDDTLMCSFQILKPSEKKAKYQY 180


>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
          Length = 293

 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = -3

Query: 471 CFNCGEPRSK*L*KKT--CNNTFFLMYRSVSPRGAGWLFGCQVTELFMNYNDLTLICRAH 298
           CFNC  P +  L +K   C+    +     + RG  + FG  +   F++ +DL LICRAH
Sbjct: 155 CFNC-LPVAAILDEKIFCCHGDKDVQGWGENDRGVSFTFGPDIVAKFLHKHDLDLICRAH 213

Query: 297 QLVNDGYKYMFDKRLVTVWSAPNYCYRCGNVASIL 193
           Q+V DGY++   ++LVT++SAPNYC    N  +++
Sbjct: 214 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMM 248


>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 540

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 32/80 (40%), Positives = 47/80 (58%)
 Frame = -3

Query: 432 KKTCNNTFFLMYRSVSPRGAGWLFGCQVTELFMNYNDLTLICRAHQLVNDGYKYMFDKRL 253
           KK      ++  RS S RG G  FG  +TE F   N L LI R+H++  +GY+ M D + 
Sbjct: 359 KKIHKKYAYMPGRSASKRGVGIQFGPDITEKFCKDNGLELIIRSHEVKPEGYEVMHDGKC 418

Query: 252 VTVWSAPNYCYRCGNVASIL 193
           +T++SAPNYC + GN  + +
Sbjct: 419 ITIFSAPNYCDQMGNKGAFI 438


>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
          Length = 417

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 20/52 (38%), Positives = 34/52 (65%)
 Frame = -3

Query: 381 RGAGWLFGCQVTELFMNYNDLTLICRAHQLVNDGYKYMFDKRLVTVWSAPNY 226
           RG G  FG  VT   +  ++  L+ R+H+   +GY+YM +K+++T++SA NY
Sbjct: 140 RGGGCYFGPDVTSQVLRKHNFELLVRSHECKYEGYEYMHNKKVITIFSASNY 191


>SB_19115| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 121

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = -3

Query: 366 LFGCQVTE-LFMNYNDLTLICRAHQLVNDGYKYMFDKRLVTVWSAPNYCYRCGNVASILE 190
           +FG ++ E L     D TL  R  ++V DGY++   ++LVT++SAPNYC    N   ++ 
Sbjct: 17  IFGEKLAEKLERTARDSTLYYR--KVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMM- 73

Query: 189 FNTVHDRTARLFQAVPDTEREVPPQH 112
             +V D     FQ +  +E++   Q+
Sbjct: 74  --SVDDTLMCSFQILKPSEKKAKYQY 97


>SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)
          Length = 465

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = -3

Query: 381 RGAGWLFGCQVTELFMNYNDLTLICRAHQLVNDGYKYMFDKRLVTVWSAPNYCYRCGNVA 202
           RG  W FG  V   ++     +L+ RAHQ             LVT++SAPNYC    N  
Sbjct: 146 RGVSWTFGGDVVREYLEKYGFSLVVRAHQ-------------LVTLFSAPNYCGEFDNAG 192

Query: 201 SIL 193
            ++
Sbjct: 193 GVM 195


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,984,484
Number of Sequences: 59808
Number of extensions: 286332
Number of successful extensions: 549
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)