BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313H04f
(407 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001760-1|AAN71515.1| 159|Drosophila melanogaster RH06526p pro... 197 4e-51
AY071556-1|AAL49178.1| 159|Drosophila melanogaster RE62581p pro... 197 4e-51
AE014134-3588|AAF57259.1| 159|Drosophila melanogaster CG12775-P... 197 4e-51
DQ081233-1|AAZ30726.1| 146|Drosophila melanogaster Ten-a transc... 29 2.4
AE014298-1756|AAF48150.1| 314|Drosophila melanogaster CG12720-P... 29 2.4
AE014298-789|AAN09151.2| 312|Drosophila melanogaster CG15771-PB... 29 3.1
AE014298-788|AAF46077.4| 355|Drosophila melanogaster CG15771-PA... 29 3.1
AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein. 28 4.1
AY119475-1|AAM50129.1| 1470|Drosophila melanogaster GH05619p pro... 28 4.1
AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-P... 28 4.1
AE014297-2096|AAF55237.2| 1470|Drosophila melanogaster CG31150-P... 28 4.1
U28966-1|AAB52512.1| 419|Drosophila melanogaster septin protein. 27 7.2
BT001708-1|AAN71463.1| 656|Drosophila melanogaster RE66405p pro... 27 7.2
AY061281-1|AAL28829.1| 419|Drosophila melanogaster LD20082p pro... 27 7.2
AY058614-1|AAL13843.1| 676|Drosophila melanogaster LD30829p pro... 27 7.2
AE014297-2823|AAF55783.1| 419|Drosophila melanogaster CG4173-PA... 27 7.2
AE013599-2227|AAF58035.2| 746|Drosophila melanogaster CG15707-P... 27 7.2
>BT001760-1|AAN71515.1| 159|Drosophila melanogaster RH06526p
protein.
Length = 159
Score = 197 bits (481), Expect = 4e-51
Identities = 85/118 (72%), Positives = 106/118 (89%)
Frame = +3
Query: 48 FARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGV 227
F+R FR HG IPLSTYM+V+K+GDIVDI+G+GAVQKG+P+K YHGKTGR++NVT HA+GV
Sbjct: 15 FSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGKTGRIFNVTQHAVGV 74
Query: 228 IVNKRVLXRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQP 401
IVNKRV +I+ KR+N+R+EH+ HSKCR+DFL+RVKENERLLKEAK G+ V+LKRQP
Sbjct: 75 IVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAKEKGQWVSLKRQP 132
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 5 MTNSKGYRRGT 37
MTNSKGYRRGT
Sbjct: 1 MTNSKGYRRGT 11
>AY071556-1|AAL49178.1| 159|Drosophila melanogaster RE62581p
protein.
Length = 159
Score = 197 bits (481), Expect = 4e-51
Identities = 85/118 (72%), Positives = 106/118 (89%)
Frame = +3
Query: 48 FARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGV 227
F+R FR HG IPLSTYM+V+K+GDIVDI+G+GAVQKG+P+K YHGKTGR++NVT HA+GV
Sbjct: 15 FSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGKTGRIFNVTQHAVGV 74
Query: 228 IVNKRVLXRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQP 401
IVNKRV +I+ KR+N+R+EH+ HSKCR+DFL+RVKENERLLKEAK G+ V+LKRQP
Sbjct: 75 IVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAKEKGQWVSLKRQP 132
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 5 MTNSKGYRRGT 37
MTNSKGYRRGT
Sbjct: 1 MTNSKGYRRGT 11
>AE014134-3588|AAF57259.1| 159|Drosophila melanogaster CG12775-PA
protein.
Length = 159
Score = 197 bits (481), Expect = 4e-51
Identities = 85/118 (72%), Positives = 106/118 (89%)
Frame = +3
Query: 48 FARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGV 227
F+R FR HG IPLSTYM+V+K+GDIVDI+G+GAVQKG+P+K YHGKTGR++NVT HA+GV
Sbjct: 15 FSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGKTGRIFNVTQHAVGV 74
Query: 228 IVNKRVLXRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQP 401
IVNKRV +I+ KR+N+R+EH+ HSKCR+DFL+RVKENERLLKEAK G+ V+LKRQP
Sbjct: 75 IVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAKEKGQWVSLKRQP 132
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 5 MTNSKGYRRGT 37
MTNSKGYRRGT
Sbjct: 1 MTNSKGYRRGT 11
>DQ081233-1|AAZ30726.1| 146|Drosophila melanogaster Ten-a
transcript variant VIII protein.
Length = 146
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 12 TPRVTAAAPVYXFARRFRTHGTIPLSTYMKVYKV 113
TP VTAAAP +A+ + T+P + +KV V
Sbjct: 112 TPTVTAAAPEVTYAQPHQQRSTMPAGSPLKVSTV 145
>AE014298-1756|AAF48150.1| 314|Drosophila melanogaster CG12720-PA
protein.
Length = 314
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 12 TPRVTAAAPVYXFARRFRTHGTIPLSTYMKVYKV 113
TP VTAAAP +A+ + T+P + +KV V
Sbjct: 30 TPTVTAAAPEVTYAQPHQQRSTMPAGSPLKVSTV 63
>AE014298-789|AAN09151.2| 312|Drosophila melanogaster CG15771-PB,
isoform B protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 MTNSKGYRRGTSVLVRSQVPHTWNYSALHVH-ESVQSWRHCRHQRQWCSSKGYATQSIPW 181
++ G +S + H +++ H E Q H HQRQW +G S+P
Sbjct: 240 ISQGSGSGSSSSAICVPGAGHGYHHHHHQQHQEQQQQHHHHHHQRQWLYRRGV---SLPA 296
Query: 182 KDRSRVQRDCSC 217
D S + + SC
Sbjct: 297 MDCSNSEAENSC 308
>AE014298-788|AAF46077.4| 355|Drosophila melanogaster CG15771-PA,
isoform A protein.
Length = 355
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 MTNSKGYRRGTSVLVRSQVPHTWNYSALHVH-ESVQSWRHCRHQRQWCSSKGYATQSIPW 181
++ G +S + H +++ H E Q H HQRQW +G S+P
Sbjct: 283 ISQGSGSGSSSSAICVPGAGHGYHHHHHQQHQEQQQQHHHHHHQRQWLYRRGV---SLPA 339
Query: 182 KDRSRVQRDCSC 217
D S + + SC
Sbjct: 340 MDCSNSEAENSC 351
>AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.
Length = 1854
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 204 VTAHALGVIVNKRVLXRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKE 359
V G+ +R IIP N ++E +HS + ++ +N RL+ E
Sbjct: 612 VNGQTNGIPTRRRPKSSIIPSSSNGKLEQREHSLVTSESFHQISDNLRLMSE 663
>AY119475-1|AAM50129.1| 1470|Drosophila melanogaster GH05619p protein.
Length = 1470
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 158 TLLNCTIASDVYNVSNFVHFHVRGERNSSMCAEP 57
T L+ TI D+YN+ NF + V + +C++P
Sbjct: 1405 TQLSSTIQFDLYNILNFEIYGVYKHQMCGLCSKP 1438
>AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-PD,
isoform D protein.
Length = 1854
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 204 VTAHALGVIVNKRVLXRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKE 359
V G+ +R IIP N ++E +HS + ++ +N RL+ E
Sbjct: 612 VNGQTNGIPTRRRPKSSIIPSSSNGKLEQREHSLVTSESFHQISDNLRLMSE 663
>AE014297-2096|AAF55237.2| 1470|Drosophila melanogaster CG31150-PA
protein.
Length = 1470
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 158 TLLNCTIASDVYNVSNFVHFHVRGERNSSMCAEP 57
T L+ TI D+YN+ NF + V + +C++P
Sbjct: 1405 TQLSSTIQFDLYNILNFEIYGVYKHQMCGLCSKP 1438
>U28966-1|AAB52512.1| 419|Drosophila melanogaster septin protein.
Length = 419
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 264 KRINIRVE-HVKHSKCRQDFLKRVKENERLLKEAK--AAGKTVNLKRQPA 404
KR N E K + RQ F++RVKE E LKE++ K LKR A
Sbjct: 328 KRSNHLAELQSKEEEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHA 377
>BT001708-1|AAN71463.1| 656|Drosophila melanogaster RE66405p
protein.
Length = 656
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 155 LLNCTIASDVYNVSNFVHFHVRGERNSSMCAEP 57
L+NC IA+ V+ ++ V NS++ AEP
Sbjct: 431 LINCDIANMHCFVNTYIKIRVHENNNSTLVAEP 463
>AY061281-1|AAL28829.1| 419|Drosophila melanogaster LD20082p
protein.
Length = 419
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 264 KRINIRVE-HVKHSKCRQDFLKRVKENERLLKEAK--AAGKTVNLKRQPA 404
KR N E K + RQ F++RVKE E LKE++ K LKR A
Sbjct: 328 KRSNHLAELQSKEEEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHA 377
>AY058614-1|AAL13843.1| 676|Drosophila melanogaster LD30829p
protein.
Length = 676
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 155 LLNCTIASDVYNVSNFVHFHVRGERNSSMCAEP 57
L+NC IA+ V+ ++ V NS++ AEP
Sbjct: 361 LINCDIANMHCFVNTYIKIRVHENNNSTLVAEP 393
>AE014297-2823|AAF55783.1| 419|Drosophila melanogaster CG4173-PA
protein.
Length = 419
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 264 KRINIRVE-HVKHSKCRQDFLKRVKENERLLKEAK--AAGKTVNLKRQPA 404
KR N E K + RQ F++RVKE E LKE++ K LKR A
Sbjct: 328 KRSNHLAELQSKEEEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHA 377
>AE013599-2227|AAF58035.2| 746|Drosophila melanogaster CG15707-PA
protein.
Length = 746
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 155 LLNCTIASDVYNVSNFVHFHVRGERNSSMCAEP 57
L+NC IA+ V+ ++ V NS++ AEP
Sbjct: 431 LINCDIANMHCFVNTYIKIRVHENNNSTLVAEP 463
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,135,281
Number of Sequences: 53049
Number of extensions: 355197
Number of successful extensions: 1184
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -