Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313H04f
(407 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal prote... 160 4e-40
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 33 0.060
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 33 0.060
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 33 0.060
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 30 0.56
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 29 1.7
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 29 1.7
AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 28 3.0
AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in ... 28 3.0
AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 28 3.0
AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q... 28 3.0
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical pr... 27 3.9
X53244-1|CAA37334.1| 75|Caenorhabditis elegans metallothionein... 27 5.2
U64853-6|AAB04979.1| 75|Caenorhabditis elegans Metallothionein... 27 5.2
M92909-1|AAA28110.1| 75|Caenorhabditis elegans metallothionein... 27 5.2
D17364-1|BAA04180.1| 75|Caenorhabditis elegans metallothionein... 27 5.2
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 27 6.9
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 26 9.1
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 26 9.1
>L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 21 protein.
Length = 161
Score = 160 bits (388), Expect = 4e-40
Identities = 77/121 (63%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
Frame = +3
Query: 42 YXFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHAL 221
Y FAR FR HG LSTY YK GD+VDI+ NGA QKGMP K YHG+TGR++NVT A+
Sbjct: 13 YMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAV 72
Query: 222 GVIVNKRVLXRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTV-NLKRQ 398
G+IVNKRV I+PKRINIR+EH+K SKCR DFL RVK N+ K AK+AG+ V LKR
Sbjct: 73 GIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRL 132
Query: 399 P 401
P
Sbjct: 133 P 133
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 33.5 bits (73), Expect = 0.060
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 190 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 53
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.060
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 190 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 53
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.060
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 190 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 53
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 220 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 265
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 30.3 bits (65), Expect = 0.56
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 107 QSWRHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSRCDCQQAC 244
Q RHC Q C S Y W+ RSRV +C+ + Q C
Sbjct: 366 QPVRHCSEQDATCDSPFYWCDMKLWRCRSRVVYGGNCTGYEGTQIC 411
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +2
Query: 200 QRDCSCSRCDCQQACSXKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 379
Q CSC + Q+CS + Q P +C Q Q + Q A Q CRQ
Sbjct: 34 QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91
Query: 380 RQPEETAS 403
Q S
Sbjct: 92 CQSAPAVS 99
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +2
Query: 200 QRDCSCSRCDCQQACSXKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 379
Q CSC + Q+CS + Q P +C Q Q + Q A Q CRQ
Sbjct: 34 QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91
Query: 380 RQPEETAS 403
Q S
Sbjct: 92 CQSAPAVS 99
>AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 8 protein.
Length = 445
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 200 QRDCSCSRCDCQQACSXKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 379
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 380 RQPEETAS 403
Q + AS
Sbjct: 89 CQQQCQAS 96
>AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 7 protein.
Length = 438
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 200 QRDCSCSRCDCQQACSXKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 379
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 380 RQPEETAS 403
Q + AS
Sbjct: 89 CQQQCQAS 96
>AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 6 protein.
Length = 388
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 200 QRDCSCSRCDCQQACSXKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 379
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 380 RQPEETAS 403
Q + AS
Sbjct: 89 CQQQCQAS 96
>AF016451-3|AAB66001.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 5
protein.
Length = 388
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 200 QRDCSCSRCDCQQACSXKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 379
Q CSC + Q+CS + Q P +C Q QT+ Q + ++T+ + C+Q
Sbjct: 35 QSQCSCQQVQQTQSCSCQSAPVQQQSPSCSCAQPQ-QTQ-----QVQVQSTQCAPACQQS 88
Query: 380 RQPEETAS 403
Q + AS
Sbjct: 89 CQQQCQAS 96
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 344 LILFDSLKEVLSALGVL 294
LILFD+LK VL ++GVL
Sbjct: 200 LILFDALKNVLQSVGVL 216
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 344 LILFDSLKEVLSALGVL 294
LILFD+LK VL ++GVL
Sbjct: 200 LILFDALKNVLQSVGVL 216
>Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical
protein D1086.1 protein.
Length = 181
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 164 TQSIPW--KDRSRVQRDCSCSRCDCQQACSXKDYTEA 268
T+ + W D+SR+ D C++ ++ C KD+ +A
Sbjct: 120 TECVQWYFSDKSRMSTDQKCAQFKAKKQCIEKDFGKA 156
>X53244-1|CAA37334.1| 75|Caenorhabditis elegans metallothionein-I
protein.
Length = 75
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 206 DCSCSRCDCQQACSXKDYTEAHQ 274
DC C+ C C + D T HQ
Sbjct: 47 DCKCANCHCAEQKQCGDKTHQHQ 69
>U64853-6|AAB04979.1| 75|Caenorhabditis elegans Metallothionein
protein 1 protein.
Length = 75
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 206 DCSCSRCDCQQACSXKDYTEAHQ 274
DC C+ C C + D T HQ
Sbjct: 47 DCKCANCHCAEQKQCGDKTHQHQ 69
>M92909-1|AAA28110.1| 75|Caenorhabditis elegans metallothionein I
protein.
Length = 75
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 206 DCSCSRCDCQQACSXKDYTEAHQ 274
DC C+ C C + D T HQ
Sbjct: 47 DCKCANCHCAEQKQCGDKTHQHQ 69
>D17364-1|BAA04180.1| 75|Caenorhabditis elegans metallothionein-I
protein.
Length = 75
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 206 DCSCSRCDCQQACSXKDYTEAHQ 274
DC C+ C C + D T HQ
Sbjct: 47 DCKCANCHCAEQKQCGDKTHQHQ 69
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 218 SRCDCQQACSXKDYTEAHQYPC*AC 292
S +C+QAC Y+ + PC AC
Sbjct: 1610 SASECKQACKTGTYSNSGLEPCSAC 1634
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 200 QRDCSCSRCDCQQACSXKDYTEAHQYPC*ACQALQVQT 313
++ C C+ Q +CS + T+ QY C VQT
Sbjct: 26 RQSCGCAS-QVQPSCSCQQATQPQQYSCSCQNTAPVQT 62
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 200 QRDCSCSRCDCQQACSXKDYTEAHQYPC*ACQALQVQT 313
++ C C+ Q +CS + T+ QY C VQT
Sbjct: 27 RQSCGCAS-QVQPSCSCQQATQPQQYSCSCQNTAPVQT 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,041,641
Number of Sequences: 27780
Number of extensions: 175327
Number of successful extensions: 676
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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