BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313H01f (521 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q38VH0 Cluster: Putative uncharacterized protein; n=1; ... 35 0.98 UniRef50_Q54MF7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2 UniRef50_UPI00006CF310 Cluster: hypothetical protein TTHERM_0006... 32 9.2 >UniRef50_Q38VH0 Cluster: Putative uncharacterized protein; n=1; Lactobacillus sakei subsp. sakei 23K|Rep: Putative uncharacterized protein - Lactobacillus sakei subsp. sakei (strain 23K) Length = 424 Score = 35.1 bits (77), Expect = 0.98 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = -2 Query: 445 NYWKRFTVTCSVLLINNKVSQN*MLQ--YYLVLLWFVIRSE 329 N W F V C ++L++N + N M+Q Y VL WF+ E Sbjct: 166 NAWNHFVVVCLIILLSN-IRNNRMIQITYIFVLFWFLSHGE 205 >UniRef50_Q54MF7 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 1234 Score = 32.7 bits (71), Expect = 5.2 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = +3 Query: 231 NVSIKTKNKYVTIY*HGYSNCRE--QNKFP*KLRISDLITNHNNTR*YCNI*FWLTLLFI 404 NVSIK K++ V ++ ++NC+E QN K +I DLI + YC F+L + + Sbjct: 209 NVSIKFKDQRVRLHHTFFNNCKEIIQNVNVIKNKIKDLIPKNGV---YCKRTFYLKSIEL 265 Query: 405 NRTEQVT 425 N+ ++ Sbjct: 266 NKNSAIS 272 >UniRef50_UPI00006CF310 Cluster: hypothetical protein TTHERM_00066870; n=1; Tetrahymena thermophila SB210|Rep: hypothetical protein TTHERM_00066870 - Tetrahymena thermophila SB210 Length = 2095 Score = 31.9 bits (69), Expect = 9.2 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = -3 Query: 384 KIKCYNIISYYYGL*LDLKFLVFMEIYFVLCNLNNHASKSLHTYFSF*Y 238 KIK Y+ Y+ GL + +F+ Y ++ NN + +L+TY ++ Y Sbjct: 1821 KIKLYHFALYFTGLFI-FSITIFVIAYSIISKFNNSLNPALNTYQNYVY 1868 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 404,295,966 Number of Sequences: 1657284 Number of extensions: 6737037 Number of successful extensions: 9649 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 9468 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9649 length of database: 575,637,011 effective HSP length: 95 effective length of database: 418,195,031 effective search space used: 32619212418 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -