Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313H01f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q38VH0 Cluster: Putative uncharacterized protein; n=1; ...    35   0.98 
UniRef50_Q54MF7 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_UPI00006CF310 Cluster: hypothetical protein TTHERM_0006...    32   9.2  

>UniRef50_Q38VH0 Cluster: Putative uncharacterized protein; n=1;
           Lactobacillus sakei subsp. sakei 23K|Rep: Putative
           uncharacterized protein - Lactobacillus sakei subsp.
           sakei (strain 23K)
          Length = 424

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -2

Query: 445 NYWKRFTVTCSVLLINNKVSQN*MLQ--YYLVLLWFVIRSE 329
           N W  F V C ++L++N +  N M+Q  Y  VL WF+   E
Sbjct: 166 NAWNHFVVVCLIILLSN-IRNNRMIQITYIFVLFWFLSHGE 205


>UniRef50_Q54MF7 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1234

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = +3

Query: 231 NVSIKTKNKYVTIY*HGYSNCRE--QNKFP*KLRISDLITNHNNTR*YCNI*FWLTLLFI 404
           NVSIK K++ V ++   ++NC+E  QN    K +I DLI  +     YC   F+L  + +
Sbjct: 209 NVSIKFKDQRVRLHHTFFNNCKEIIQNVNVIKNKIKDLIPKNGV---YCKRTFYLKSIEL 265

Query: 405 NRTEQVT 425
           N+   ++
Sbjct: 266 NKNSAIS 272


>UniRef50_UPI00006CF310 Cluster: hypothetical protein TTHERM_00066870;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00066870 - Tetrahymena thermophila SB210
          Length = 2095

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -3

Query: 384  KIKCYNIISYYYGL*LDLKFLVFMEIYFVLCNLNNHASKSLHTYFSF*Y 238
            KIK Y+   Y+ GL +     +F+  Y ++   NN  + +L+TY ++ Y
Sbjct: 1821 KIKLYHFALYFTGLFI-FSITIFVIAYSIISKFNNSLNPALNTYQNYVY 1868


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,295,966
Number of Sequences: 1657284
Number of extensions: 6737037
Number of successful extensions: 9649
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9649
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)