Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313H01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119616-1|AAM50270.1|  809|Drosophila melanogaster LD43174p pro...    28   8.8  
AE014297-2400|AAN13751.2|  809|Drosophila melanogaster CG7660-PB...    28   8.8  
AE014297-2399|AAF55458.2|  831|Drosophila melanogaster CG7660-PA...    28   8.8  

>AY119616-1|AAM50270.1|  809|Drosophila melanogaster LD43174p
           protein.
          Length = 809

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 135 CSLVKIKIDNLFTSAF-VNCLNFRYINCV*FSDCE 34
           C  + ++ D+ F SAF V CLNF  ++ V   DC+
Sbjct: 356 CMPIHVEPDDEFFSAFGVRCLNFVRLSLVPSPDCQ 390


>AE014297-2400|AAN13751.2|  809|Drosophila melanogaster CG7660-PB,
           isoform B protein.
          Length = 809

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 135 CSLVKIKIDNLFTSAF-VNCLNFRYINCV*FSDCE 34
           C  + ++ D+ F SAF V CLNF  ++ V   DC+
Sbjct: 356 CMPIHVEPDDEFFSAFGVRCLNFVRLSLVPSPDCQ 390


>AE014297-2399|AAF55458.2|  831|Drosophila melanogaster CG7660-PA,
           isoform A protein.
          Length = 831

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 135 CSLVKIKIDNLFTSAF-VNCLNFRYINCV*FSDCE 34
           C  + ++ D+ F SAF V CLNF  ++ V   DC+
Sbjct: 356 CMPIHVEPDDEFFSAFGVRCLNFVRLSLVPSPDCQ 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,603,197
Number of Sequences: 53049
Number of extensions: 288162
Number of successful extensions: 335
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)