Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313G12f
         (327 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF245116-1|AAF66981.1|  743|Drosophila melanogaster cactin protein.    27   4.2  
AE014298-3022|AAF50904.2|  762|Drosophila melanogaster CG1676-PA...    27   4.2  
AE014296-2055|AAF49993.1|  614|Drosophila melanogaster CG14127-P...    27   7.3  
AY060673-1|AAL28221.3|  446|Drosophila melanogaster GH10523p pro...    26   9.7  
AE014297-1276|AAF54621.2|  446|Drosophila melanogaster CG31388-P...    26   9.7  

>AF245116-1|AAF66981.1|  743|Drosophila melanogaster cactin protein.
          Length = 743

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 133 PRSTRESQLDRVRRPRSAASHRDGRTREK 47
           PRS+R    DR R       HRD R +E+
Sbjct: 25  PRSSRNRDRDREREREKDRDHRDHRDKER 53


>AE014298-3022|AAF50904.2|  762|Drosophila melanogaster CG1676-PA
           protein.
          Length = 762

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 133 PRSTRESQLDRVRRPRSAASHRDGRTREK 47
           PRS+R    DR R       HRD R +E+
Sbjct: 67  PRSSRNRDRDREREREKDRDHRDHRDKER 95


>AE014296-2055|AAF49993.1|  614|Drosophila melanogaster CG14127-PA
           protein.
          Length = 614

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -1

Query: 156 NSIACAAGHDQHANRS*TGFDDPVRPLHTVTDERE 52
           +S+  ++G DQH  ++  G ++PV  L +VT + E
Sbjct: 300 DSVGSSSG-DQHTAKTENGEEEPVSQLESVTSDME 333


>AY060673-1|AAL28221.3|  446|Drosophila melanogaster GH10523p
           protein.
          Length = 446

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 91  PRSAASHRDGRTREKYHAVSQIQGVYYCKI 2
           P+S  +  + RT +KYH +++  G   C+I
Sbjct: 377 PKSYVTPSECRTHQKYHNLTRDHGCEICRI 406


>AE014297-1276|AAF54621.2|  446|Drosophila melanogaster CG31388-PA
           protein.
          Length = 446

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 91  PRSAASHRDGRTREKYHAVSQIQGVYYCKI 2
           P+S  +  + RT +KYH +++  G   C+I
Sbjct: 377 PKSYVTPSECRTHQKYHNLTRDHGCEICRI 406


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,577,072
Number of Sequences: 53049
Number of extensions: 215785
Number of successful extensions: 622
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 693319869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)