Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313G05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   1.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 326 NL*YNPETNCSEWSDN 373
           NL +NP+ N  +W +N
Sbjct: 950 NLVFNPDQNVCDWPEN 965


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 236 HVSRHEATTLHFGYPVTA*LLLRELC 159
           + S HEA+ ++FGY +   ++    C
Sbjct: 160 YYSVHEASIINFGYTLAKFMIFTSTC 185


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +3

Query: 6   IHFYIYIDVKFSNVSHEKLHNLHKWRYLTVCAYY 107
           I FY+     F+       +N   +  +T C+YY
Sbjct: 85  ISFYLEATDDFAYFLEVSNNNFKTYSNVTTCSYY 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,229
Number of Sequences: 336
Number of extensions: 2367
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)