Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313G05f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0476 - 3388176-3389267                                           31   0.42 
02_05_0713 + 31159574-31160764                                         29   3.0  
01_06_1172 - 35115248-35115874                                         29   3.0  
09_06_0222 - 21655236-21655841                                         28   4.0  
12_01_0311 + 2345492-2346325                                           28   5.2  
06_01_0902 - 6934236-6935546                                           27   6.9  
05_01_0262 + 2013396-2013572,2013921-2014712                           27   6.9  
06_01_0611 + 4420873-4422207                                           27   9.1  

>06_01_0476 - 3388176-3389267
          Length = 363

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 312 VLPVCGHAFRIEESDSGLISAENRTSCLKA*G 217
           +LPVCGHAF I+  D+ L+S      C  A G
Sbjct: 146 LLPVCGHAFHIDCIDTWLLSNSTCPLCRAALG 177


>02_05_0713 + 31159574-31160764
          Length = 396

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 312 VLPVCGHAFRIEESDSGLISAENRTSC 232
           +LPVCGHAF +   D+ L+S      C
Sbjct: 167 LLPVCGHAFHLHCIDTWLLSNSTCPLC 193


>01_06_1172 - 35115248-35115874
          Length = 208

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 312 VLPVCGHAFRIEESDSGLISAENRTSC 232
           VLP CGH F +   D+ L+S ++  +C
Sbjct: 139 VLPRCGHGFHVRCVDTWLVSHDSCPTC 165


>09_06_0222 - 21655236-21655841
          Length = 201

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 312 VLPVCGHAFRIEESDSGLISAENRTSCLKA 223
           VLP CGH F     D  L+S     SC +A
Sbjct: 121 VLPPCGHGFHAACVDVWLVSTSTCPSCRRA 150


>12_01_0311 + 2345492-2346325
          Length = 277

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 312 VLPVCGHAFRIEESDSGLISA 250
           V P+C HA  +EE D G++++
Sbjct: 255 VCPLCRHALPVEEQDEGVVAS 275


>06_01_0902 - 6934236-6935546
          Length = 436

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 312 VLPVCGHAFRIEESDSGLISAENRTSC 232
           +LP+CGHAF +   D+ L+S      C
Sbjct: 205 LLPLCGHAFHLHCIDTWLLSNSTCPLC 231


>05_01_0262 + 2013396-2013572,2013921-2014712
          Length = 322

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +3

Query: 276 PLSGTRDRIPEGHSKNKIYNIILK-RIVLNGPTTVISKAWTCLKSPALISLLKAVKSFFK 452
           P +   D +      N+ Y  +LK R+VLN    ++   WT      ++ L  AV+  F+
Sbjct: 233 PTTVPLDPVTPASFDNQYYKNVLKHRVVLNSDQALLDSPWTA----GVVKLHSAVEKVFQ 288

Query: 453 V 455
           V
Sbjct: 289 V 289


>06_01_0611 + 4420873-4422207
          Length = 444

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 312 VLPVCGHAFRIEESDSGLISAENRTSC 232
           +LP CGHAF +   D+ L+S      C
Sbjct: 138 LLPTCGHAFHVPCIDAWLLSHSTCPIC 164


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,767,866
Number of Sequences: 37544
Number of extensions: 229276
Number of successful extensions: 509
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)