Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313G01f
         (476 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   2.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   4.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 42  HLFNIFLRQIYL*DYNCISVHLMIIIQHLQLNDVSHIRSLVF 167
           H+FNI ++ + L D   I     III  L +  + ++    F
Sbjct: 74  HIFNILMKNVTLNDVVFIFCSAPIIITILDIEILGYVNKAKF 115


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 39  DHLFNIFLRQIY 74
           D+ FN+FLRQ++
Sbjct: 164 DNNFNVFLRQVF 175


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 339 KKPESDDEKKRKSKWDQAAPNIGSKPNIKQPG 244
           +K  SDDE + + K ++       KP I+  G
Sbjct: 220 EKELSDDEAEEEKKEEEGEDKDKDKPKIEDVG 251


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 265 AEYQTTRPSATTTDNKHHWHKGN 197
           A  Q    +A T +  HH H G+
Sbjct: 306 AAQQQNNNNAATNNQNHHHHAGH 328


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 433 PHRKILSPILMXHI 474
           PH+  L+PIL  HI
Sbjct: 184 PHQGPLTPILYDHI 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,758
Number of Sequences: 336
Number of extensions: 1071
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)