Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313G01f
(476 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063793-1|AAH63793.1| 308|Homo sapiens SAP30 binding protein p... 40 0.003
BC030233-1|AAH30233.1| 308|Homo sapiens SAP30 binding protein p... 40 0.003
BC013409-1|AAH13409.2| 303|Homo sapiens SAP30BP protein protein. 40 0.003
BC007592-1|AAH07592.1| 308|Homo sapiens SAP30BP protein protein. 40 0.003
AY082382-1|AAL92491.1| 308|Homo sapiens HCNGP protein. 40 0.003
AK095265-1|BAC04514.1| 292|Homo sapiens protein ( Homo sapiens ... 40 0.003
AF450482-1|AAL47177.1| 308|Homo sapiens transcription-regulatin... 40 0.003
AF119664-1|AAF17221.1| 308|Homo sapiens transcriptional regulat... 40 0.003
AF087869-1|AAM10497.1| 308|Homo sapiens HCNGP protein. 40 0.003
>BC063793-1|AAH63793.1| 308|Homo sapiens SAP30 binding protein
protein.
Length = 308
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = -3
Query: 321 DEKKRKSKWDQAAP-NIGSKPNIKQ-----PGLVQQPLTTNITGTKGTVIAAFGSLPKKP 160
D +KRKSKWD A P ++P I P +V +TT+ +G+K TVI+A G++ KK
Sbjct: 249 DAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVT--VTTSASGSKTTVISAVGTIVKKA 306
Query: 159 K 157
K
Sbjct: 307 K 307
>BC030233-1|AAH30233.1| 308|Homo sapiens SAP30 binding protein
protein.
Length = 308
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = -3
Query: 321 DEKKRKSKWDQAAP-NIGSKPNIKQ-----PGLVQQPLTTNITGTKGTVIAAFGSLPKKP 160
D +KRKSKWD A P ++P I P +V +TT+ +G+K TVI+A G++ KK
Sbjct: 249 DAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVT--VTTSASGSKTTVISAVGTIVKKA 306
Query: 159 K 157
K
Sbjct: 307 K 307
>BC013409-1|AAH13409.2| 303|Homo sapiens SAP30BP protein protein.
Length = 303
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = -3
Query: 321 DEKKRKSKWDQAAP-NIGSKPNIKQ-----PGLVQQPLTTNITGTKGTVIAAFGSLPKKP 160
D +KRKSKWD A P ++P I P +V +TT+ +G+K TVI+A G++ KK
Sbjct: 244 DAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVT--VTTSASGSKTTVISAVGTIVKKA 301
Query: 159 K 157
K
Sbjct: 302 K 302
>BC007592-1|AAH07592.1| 308|Homo sapiens SAP30BP protein protein.
Length = 308
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = -3
Query: 321 DEKKRKSKWDQAAP-NIGSKPNIKQ-----PGLVQQPLTTNITGTKGTVIAAFGSLPKKP 160
D +KRKSKWD A P ++P I P +V +TT+ +G+K TVI+A G++ KK
Sbjct: 249 DAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVT--VTTSASGSKTTVISAVGTIVKKA 306
Query: 159 K 157
K
Sbjct: 307 K 307
>AY082382-1|AAL92491.1| 308|Homo sapiens HCNGP protein.
Length = 308
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = -3
Query: 321 DEKKRKSKWDQAAP-NIGSKPNIKQ-----PGLVQQPLTTNITGTKGTVIAAFGSLPKKP 160
D +KRKSKWD A P ++P I P +V +TT+ +G+K TVI+A G++ KK
Sbjct: 249 DAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVT--VTTSASGSKTTVISAVGTIVKKA 306
Query: 159 K 157
K
Sbjct: 307 K 307
>AK095265-1|BAC04514.1| 292|Homo sapiens protein ( Homo sapiens
cDNA FLJ37946 fis, clone CTONG2008792, highly similar to
TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP. ).
Length = 292
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = -3
Query: 321 DEKKRKSKWDQAAP-NIGSKPNIKQ-----PGLVQQPLTTNITGTKGTVIAAFGSLPKKP 160
D +KRKSKWD A P ++P I P +V +TT+ +G+K TVI+A G++ KK
Sbjct: 233 DAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVT--VTTSASGSKTTVISAVGTIVKKA 290
Query: 159 K 157
K
Sbjct: 291 K 291
>AF450482-1|AAL47177.1| 308|Homo sapiens transcription-regulating
protein protein.
Length = 308
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = -3
Query: 321 DEKKRKSKWDQAAP-NIGSKPNIKQ-----PGLVQQPLTTNITGTKGTVIAAFGSLPKKP 160
D +KRKSKWD A P ++P I P +V +TT+ +G+K TVI+A G++ KK
Sbjct: 249 DAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVT--VTTSASGSKTTVISAVGTIVKKA 306
Query: 159 K 157
K
Sbjct: 307 K 307
>AF119664-1|AAF17221.1| 308|Homo sapiens transcriptional regulator
protein HCNGP protein.
Length = 308
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = -3
Query: 321 DEKKRKSKWDQAAP-NIGSKPNIKQ-----PGLVQQPLTTNITGTKGTVIAAFGSLPKKP 160
D +KRKSKWD A P ++P I P +V +TT+ +G+K TVI+A G++ KK
Sbjct: 249 DAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVT--VTTSASGSKTTVISAVGTIVKKA 306
Query: 159 K 157
K
Sbjct: 307 K 307
>AF087869-1|AAM10497.1| 308|Homo sapiens HCNGP protein.
Length = 308
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Frame = -3
Query: 321 DEKKRKSKWDQAAP-NIGSKPNIKQ-----PGLVQQPLTTNITGTKGTVIAAFGSLPKKP 160
D +KRKSKWD A P ++P I P +V +TT+ +G+K TVI+A G++ KK
Sbjct: 249 DAQKRKSKWDSAIPVTTIAQPTILTTTATLPAVVT--VTTSASGSKTTVISAVGTIVKKA 306
Query: 159 K 157
K
Sbjct: 307 K 307
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,991,132
Number of Sequences: 237096
Number of extensions: 642307
Number of successful extensions: 1463
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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