Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313F12f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    35   0.98 
UniRef50_Q22V99 Cluster: Type III restriction enzyme, res subuni...    35   1.3  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    34   2.3  
UniRef50_Q243C0 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q8II39 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +2

Query: 476 RGGARYPIRPIVSRI 520
           RGGARYPIRPIVSRI
Sbjct: 260 RGGARYPIRPIVSRI 274


>UniRef50_Q22V99 Cluster: Type III restriction enzyme, res subunit
            family protein; n=2; Tetrahymena thermophila|Rep: Type
            III restriction enzyme, res subunit family protein -
            Tetrahymena thermophila SB210
          Length = 2098

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = -3

Query: 381  IQSPLTKYFLTYALT---TIFLLYLVDLMLHHIERDIIFSVISNNGREKNVT 235
            I S L  Y LTY LT   T  L YL+ L  H +E+D I   ++N   +++ T
Sbjct: 1424 IHSYLLTYLLTYLLTYLLTYLLTYLIILQKHQLEQDKIIKPLNNQVNDEDDT 1475


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -1

Query: 518 YDSL*GELGTGPPLEXXXXXFLNV 447
           YDSL GELGTGPPLE      L++
Sbjct: 278 YDSLYGELGTGPPLEVDGIDKLDI 301


>UniRef50_Q243C0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 90

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = -3

Query: 333 IFLLYLVDLMLHHIERDIIFSVISNNGREKNVTCRSIPSA*LTCIINVFSFQKSEHGKIS 154
           IF+L   D+++  + R+ IFS+ SNN +   +   SIP   L  ++N F  Q  EH ++S
Sbjct: 16  IFILIYSDVLIIIVSRNRIFSIKSNNLKPSKI---SIPC--LELLLNKFREQLEEHIEVS 70


>UniRef50_Q8II39 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 317

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -3

Query: 375 SPLTKYFLTYALTTIFLLYLVDLMLHHI-ERDIIFSVISNN 256
           +P+  + L Y +TTIF+  L+  +LHH+ E + ++  +  N
Sbjct: 45  TPMWCFLLKYFITTIFIFLLISNLLHHVYENNKLYHKLKQN 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,536,252
Number of Sequences: 1657284
Number of extensions: 7417079
Number of successful extensions: 13131
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13130
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)