Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313F04f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q05FT4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q8IJK6 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_Q05FT4 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 189

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 494 NCVTQQRELTKETFVRNKIKLKNNENYY 411
           NC+T   +  K  F +NKI + NN+N+Y
Sbjct: 36  NCLTNDLDYLKSCFCKNKIYIFNNKNFY 63


>UniRef50_Q8IJK6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1272

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +1

Query: 67  FFSKLCSNITIQQN**IRLKSKCYSXXXXXXXXXXXHDKKNLKGSV 204
           F +K C  IT Q+N      S CY            H+KKN KG V
Sbjct: 694 FNNKCCDIITNQENEKFNNTSSCYKNKDKENNFYVSHEKKNRKGDV 739


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,242,341
Number of Sequences: 1657284
Number of extensions: 5585701
Number of successful extensions: 9661
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9660
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)