Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313F04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    25   0.54 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    25   0.54 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    25   0.54 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.7  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 396 VCTKYVVVLIIFE-FDFISHKSLFGQFSLLSHTI 494
           V T  +VVL+ +E FD + +KS   QF LLS  I
Sbjct: 96  VVTTVLVVLVGYERFDILLNKSKNLQFPLLSTLI 129


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 396 VCTKYVVVLIIFE-FDFISHKSLFGQFSLLSHTI 494
           V T  +VVL+ +E FD + +KS   QF LLS  I
Sbjct: 96  VVTTVLVVLVGYERFDILLNKSKNLQFPLLSTLI 129


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 396 VCTKYVVVLIIFE-FDFISHKSLFGQFSLLSHTI 494
           V T  +VVL+ +E FD + +KS   QF LLS  I
Sbjct: 96  VVTTVLVVLVGYERFDILLNKSKNLQFPLLSTLI 129


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 446 NKIKLKNNENY 414
           NK+KL  NE+Y
Sbjct: 150 NKLKLNTNESY 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,090
Number of Sequences: 336
Number of extensions: 1809
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)