Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313F03f
         (466 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8WVK1 Cluster: PLSCR1 protein; n=1; Homo sapiens|Rep: ...    35   1.0  
UniRef50_O15162 Cluster: Phospholipid scramblase 1 (PL scramblas...    35   1.0  
UniRef50_A7IPA8 Cluster: Putative uncharacterized protein precur...    33   3.1  
UniRef50_Q86BP0 Cluster: CG31302-PC, isoform C; n=4; Drosophila ...    32   7.1  

>UniRef50_Q8WVK1 Cluster: PLSCR1 protein; n=1; Homo sapiens|Rep:
           PLSCR1 protein - Homo sapiens (Human)
          Length = 128

 Score = 34.7 bits (76), Expect = 1.0
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301
           PG+SG+  PQ   PPP P G    G  GF  P +    +P+ N      G PW   P  P
Sbjct: 34  PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92

Query: 300 LD 295
           L+
Sbjct: 93  LN 94


>UniRef50_O15162 Cluster: Phospholipid scramblase 1 (PL scramblase
           1) (Ca(2+)-dependent phospholipid scramblase 1); n=39;
           Eumetazoa|Rep: Phospholipid scramblase 1 (PL scramblase
           1) (Ca(2+)-dependent phospholipid scramblase 1) - Homo
           sapiens (Human)
          Length = 318

 Score = 34.7 bits (76), Expect = 1.0
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301
           PG+SG+  PQ   PPP P G    G  GF  P +    +P+ N      G PW   P  P
Sbjct: 34  PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92

Query: 300 LD 295
           L+
Sbjct: 93  LN 94


>UniRef50_A7IPA8 Cluster: Putative uncharacterized protein
           precursor; n=1; Xanthobacter autotrophicus Py2|Rep:
           Putative uncharacterized protein precursor -
           Xanthobacter sp. (strain Py2)
          Length = 544

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = -2

Query: 462 PGFSGFFPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXNFGEPWERVPLEPL 298
           PG  G +P G G P  P G    G  G GP        P    G+PW+  P +PL
Sbjct: 303 PGGPGGWPGGPGGPGGPGGPGGPGGPG-GPGGPGHWGGPGPGGGQPWKPNPGKPL 356


>UniRef50_Q86BP0 Cluster: CG31302-PC, isoform C; n=4; Drosophila
            melanogaster|Rep: CG31302-PC, isoform C - Drosophila
            melanogaster (Fruit fly)
          Length = 1622

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -2

Query: 441  PQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRP---LXNFGEP 325
            P  +GPPP P  ++  G  G G P KN+       L N G P
Sbjct: 1314 PGARGPPPPPRDNMMPGMGGRGQPGKNARPASPTLLDNTGHP 1355


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,921,930
Number of Sequences: 1657284
Number of extensions: 6738708
Number of successful extensions: 12201
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12113
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)