BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313F03f (466 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC032718-1|AAH32718.1| 318|Homo sapiens phospholipid scramblase... 35 0.16 BC021100-1|AAH21100.1| 318|Homo sapiens phospholipid scramblase... 35 0.16 BC017901-1|AAH17901.1| 128|Homo sapiens PLSCR1 protein protein. 35 0.16 AF224492-1|AAF80593.1| 318|Homo sapiens phospholipid scramblase... 35 0.16 AF098642-1|AAC99413.1| 318|Homo sapiens phospholipid scramblase... 35 0.16 AB006746-1|BAA32568.1| 318|Homo sapiens hMmTRA1b protein. 35 0.16 BC044651-1|AAH44651.1| 550|Homo sapiens epsin 1 protein. 31 2.6 AK022454-1|BAB14041.1| 576|Homo sapiens protein ( Homo sapiens ... 31 2.6 AF073727-1|AAD38326.1| 551|Homo sapiens EH domain-binding mitot... 31 2.6 Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 30 4.5 X98710-1|CAA67266.1| 193|Homo sapiens COL1A1 and PDGFB fusion t... 30 4.5 X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 30 4.5 X07884-1|CAA30731.1| 472|Homo sapiens protein ( Human mRNA for ... 30 4.5 M36546-1|AAA60150.1| 472|Homo sapiens COL1A1 protein. 30 4.5 M20789-1|AAB59373.1| 589|Homo sapiens alpha-1 type I collagen p... 30 4.5 BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 30 4.5 AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 30 4.5 AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 30 4.5 >BC032718-1|AAH32718.1| 318|Homo sapiens phospholipid scramblase 1 protein. Length = 318 Score = 34.7 bits (76), Expect = 0.16 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -2 Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301 PG+SG+ PQ PPP P G G GF P + +P+ N G PW P P Sbjct: 34 PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92 Query: 300 LD 295 L+ Sbjct: 93 LN 94 >BC021100-1|AAH21100.1| 318|Homo sapiens phospholipid scramblase 1 protein. Length = 318 Score = 34.7 bits (76), Expect = 0.16 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -2 Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301 PG+SG+ PQ PPP P G G GF P + +P+ N G PW P P Sbjct: 34 PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92 Query: 300 LD 295 L+ Sbjct: 93 LN 94 >BC017901-1|AAH17901.1| 128|Homo sapiens PLSCR1 protein protein. Length = 128 Score = 34.7 bits (76), Expect = 0.16 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -2 Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301 PG+SG+ PQ PPP P G G GF P + +P+ N G PW P P Sbjct: 34 PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92 Query: 300 LD 295 L+ Sbjct: 93 LN 94 >AF224492-1|AAF80593.1| 318|Homo sapiens phospholipid scramblase 1 protein. Length = 318 Score = 34.7 bits (76), Expect = 0.16 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -2 Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301 PG+SG+ PQ PPP P G G GF P + +P+ N G PW P P Sbjct: 34 PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92 Query: 300 LD 295 L+ Sbjct: 93 LN 94 >AF098642-1|AAC99413.1| 318|Homo sapiens phospholipid scramblase 1 protein. Length = 318 Score = 34.7 bits (76), Expect = 0.16 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -2 Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301 PG+SG+ PQ PPP P G G GF P + +P+ N G PW P P Sbjct: 34 PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92 Query: 300 LD 295 L+ Sbjct: 93 LN 94 >AB006746-1|BAA32568.1| 318|Homo sapiens hMmTRA1b protein. Length = 318 Score = 34.7 bits (76), Expect = 0.16 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -2 Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301 PG+SG+ PQ PPP P G G GF P + +P+ N G PW P P Sbjct: 34 PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92 Query: 300 LD 295 L+ Sbjct: 93 LN 94 >BC044651-1|AAH44651.1| 550|Homo sapiens epsin 1 protein. Length = 550 Score = 30.7 bits (66), Expect = 2.6 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = -2 Query: 435 GKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXNFGEPWERVPLEP 301 G+GP P P GS G GP + P F +PW P +P Sbjct: 318 GEGPTPDPWGSSDGGVPVSGPSASDPW-TPAPAFSDPWGGSPAKP 361 >AK022454-1|BAB14041.1| 576|Homo sapiens protein ( Homo sapiens cDNA FLJ12392 fis, clone MAMMA1002699, highly similar to Rattus norvegicus EH domain binding protein Epsin mRNA. ). Length = 576 Score = 30.7 bits (66), Expect = 2.6 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = -2 Query: 435 GKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXNFGEPWERVPLEP 301 G+GP P P GS G GP + P F +PW P +P Sbjct: 343 GEGPTPDPWGSSDGGVPVSGPSASDPW-TPAPAFSDPWGGSPAKP 386 >AF073727-1|AAD38326.1| 551|Homo sapiens EH domain-binding mitotic phosphoprotein protein. Length = 551 Score = 30.7 bits (66), Expect = 2.6 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = -2 Query: 435 GKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXNFGEPWERVPLEP 301 G+GP P P GS G GP + P F +PW P +P Sbjct: 318 GEGPTPDPWGSSDGGVPVSGPSASDPW-TPAPAFSDPWGGSPAKP 361 >Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen protein. Length = 1464 Score = 29.9 bits (64), Expect = 4.5 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301 PG GF QG G P P S G +G GPP KN G P ER P P Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249 >X98710-1|CAA67266.1| 193|Homo sapiens COL1A1 and PDGFB fusion transcript protein. Length = 193 Score = 29.9 bits (64), Expect = 4.5 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301 PG GF QG G P P S G +G GPP KN G P ER P P Sbjct: 101 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 154 >X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 protein. Length = 1069 Score = 29.9 bits (64), Expect = 4.5 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301 PG GF QG G P P S G +G GPP KN G P ER P P Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249 >X07884-1|CAA30731.1| 472|Homo sapiens protein ( Human mRNA for alpha-1(I) chain of procollagen type I. ). Length = 472 Score = 29.9 bits (64), Expect = 4.5 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301 PG GF QG G P P S G +G GPP KN G P ER P P Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249 >M36546-1|AAA60150.1| 472|Homo sapiens COL1A1 protein. Length = 472 Score = 29.9 bits (64), Expect = 4.5 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301 PG GF QG G P P S G +G GPP KN G P ER P P Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249 >M20789-1|AAB59373.1| 589|Homo sapiens alpha-1 type I collagen protein. Length = 589 Score = 29.9 bits (64), Expect = 4.5 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301 PG GF QG G P P S G +G GPP KN G P ER P P Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249 >BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1 protein. Length = 1464 Score = 29.9 bits (64), Expect = 4.5 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301 PG GF QG G P P S G +G GPP KN G P ER P P Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249 >AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen protein. Length = 1461 Score = 29.9 bits (64), Expect = 4.5 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301 PG GF QG G P P S G +G GPP KN G P ER P P Sbjct: 193 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 246 >AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain precursor variant protein. Length = 1467 Score = 29.9 bits (64), Expect = 4.5 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -2 Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301 PG GF QG G P P S G +G GPP KN G P ER P P Sbjct: 199 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 252 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 58,390,875 Number of Sequences: 237096 Number of extensions: 1225686 Number of successful extensions: 2508 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2281 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2503 length of database: 76,859,062 effective HSP length: 84 effective length of database: 56,942,998 effective search space used: 3986009860 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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