Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313F03f
         (466 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032718-1|AAH32718.1|  318|Homo sapiens phospholipid scramblase...    35   0.16 
BC021100-1|AAH21100.1|  318|Homo sapiens phospholipid scramblase...    35   0.16 
BC017901-1|AAH17901.1|  128|Homo sapiens PLSCR1 protein protein.       35   0.16 
AF224492-1|AAF80593.1|  318|Homo sapiens phospholipid scramblase...    35   0.16 
AF098642-1|AAC99413.1|  318|Homo sapiens phospholipid scramblase...    35   0.16 
AB006746-1|BAA32568.1|  318|Homo sapiens hMmTRA1b protein.             35   0.16 
BC044651-1|AAH44651.1|  550|Homo sapiens epsin 1 protein.              31   2.6  
AK022454-1|BAB14041.1|  576|Homo sapiens protein ( Homo sapiens ...    31   2.6  
AF073727-1|AAD38326.1|  551|Homo sapiens EH domain-binding mitot...    31   2.6  
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen...    30   4.5  
X98710-1|CAA67266.1|  193|Homo sapiens COL1A1 and PDGFB fusion t...    30   4.5  
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p...    30   4.5  
X07884-1|CAA30731.1|  472|Homo sapiens protein ( Human mRNA for ...    30   4.5  
M36546-1|AAA60150.1|  472|Homo sapiens COL1A1 protein.                 30   4.5  
M20789-1|AAB59373.1|  589|Homo sapiens alpha-1 type I collagen p...    30   4.5  
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha...    30   4.5  
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen...    30   4.5  
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ...    30   4.5  

>BC032718-1|AAH32718.1|  318|Homo sapiens phospholipid scramblase 1
           protein.
          Length = 318

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301
           PG+SG+  PQ   PPP P G    G  GF  P +    +P+ N      G PW   P  P
Sbjct: 34  PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92

Query: 300 LD 295
           L+
Sbjct: 93  LN 94


>BC021100-1|AAH21100.1|  318|Homo sapiens phospholipid scramblase 1
           protein.
          Length = 318

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301
           PG+SG+  PQ   PPP P G    G  GF  P +    +P+ N      G PW   P  P
Sbjct: 34  PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92

Query: 300 LD 295
           L+
Sbjct: 93  LN 94


>BC017901-1|AAH17901.1|  128|Homo sapiens PLSCR1 protein protein.
          Length = 128

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301
           PG+SG+  PQ   PPP P G    G  GF  P +    +P+ N      G PW   P  P
Sbjct: 34  PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92

Query: 300 LD 295
           L+
Sbjct: 93  LN 94


>AF224492-1|AAF80593.1|  318|Homo sapiens phospholipid scramblase 1
           protein.
          Length = 318

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301
           PG+SG+  PQ   PPP P G    G  GF  P +    +P+ N      G PW   P  P
Sbjct: 34  PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92

Query: 300 LD 295
           L+
Sbjct: 93  LN 94


>AF098642-1|AAC99413.1|  318|Homo sapiens phospholipid scramblase 1
           protein.
          Length = 318

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301
           PG+SG+  PQ   PPP P G    G  GF  P +    +P+ N      G PW   P  P
Sbjct: 34  PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92

Query: 300 LD 295
           L+
Sbjct: 93  LN 94


>AB006746-1|BAA32568.1|  318|Homo sapiens hMmTRA1b protein.
          Length = 318

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 462 PGFSGF-FPQGKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXN-----FGEPWERVPLEP 301
           PG+SG+  PQ   PPP P G    G  GF  P +    +P+ N      G PW   P  P
Sbjct: 34  PGYSGYPGPQVSYPPP-PAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPP 92

Query: 300 LD 295
           L+
Sbjct: 93  LN 94


>BC044651-1|AAH44651.1|  550|Homo sapiens epsin 1 protein.
          Length = 550

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -2

Query: 435 GKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXNFGEPWERVPLEP 301
           G+GP P P GS   G    GP   +    P   F +PW   P +P
Sbjct: 318 GEGPTPDPWGSSDGGVPVSGPSASDPW-TPAPAFSDPWGGSPAKP 361


>AK022454-1|BAB14041.1|  576|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12392 fis, clone MAMMA1002699, highly similar to
           Rattus norvegicus EH domain binding protein Epsin mRNA.
           ).
          Length = 576

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -2

Query: 435 GKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXNFGEPWERVPLEP 301
           G+GP P P GS   G    GP   +    P   F +PW   P +P
Sbjct: 343 GEGPTPDPWGSSDGGVPVSGPSASDPW-TPAPAFSDPWGGSPAKP 386


>AF073727-1|AAD38326.1|  551|Homo sapiens EH domain-binding mitotic
           phosphoprotein protein.
          Length = 551

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -2

Query: 435 GKGPPPHPNGSIFXGXKGFGPPXKNSXQRPLXNFGEPWERVPLEP 301
           G+GP P P GS   G    GP   +    P   F +PW   P +P
Sbjct: 318 GEGPTPDPWGSSDGGVPVSGPSASDPW-TPAPAFSDPWGGSPAKP 361


>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
           protein.
          Length = 1464

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301
           PG  GF  QG  G P  P  S   G +G  GPP KN         G P ER P  P
Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249


>X98710-1|CAA67266.1|  193|Homo sapiens COL1A1 and PDGFB fusion
           transcript protein.
          Length = 193

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301
           PG  GF  QG  G P  P  S   G +G  GPP KN         G P ER P  P
Sbjct: 101 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 154


>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
           protein.
          Length = 1069

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301
           PG  GF  QG  G P  P  S   G +G  GPP KN         G P ER P  P
Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249


>X07884-1|CAA30731.1|  472|Homo sapiens protein ( Human mRNA for
           alpha-1(I) chain of procollagen type I. ).
          Length = 472

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301
           PG  GF  QG  G P  P  S   G +G  GPP KN         G P ER P  P
Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249


>M36546-1|AAA60150.1|  472|Homo sapiens COL1A1 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301
           PG  GF  QG  G P  P  S   G +G  GPP KN         G P ER P  P
Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249


>M20789-1|AAB59373.1|  589|Homo sapiens alpha-1 type I collagen
           protein.
          Length = 589

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301
           PG  GF  QG  G P  P  S   G +G  GPP KN         G P ER P  P
Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249


>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
           protein.
          Length = 1464

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301
           PG  GF  QG  G P  P  S   G +G  GPP KN         G P ER P  P
Sbjct: 196 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249


>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
           protein.
          Length = 1461

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301
           PG  GF  QG  G P  P  S   G +G  GPP KN         G P ER P  P
Sbjct: 193 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 246


>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
           precursor variant protein.
          Length = 1467

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 462 PGFSGFFPQGK-GPPPHPNGSIFXGXKGF-GPPXKNSXQRPLXNFGEPWERVPLEP 301
           PG  GF  QG  G P  P  S   G +G  GPP KN         G P ER P  P
Sbjct: 199 PGPQGF--QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 252


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,390,875
Number of Sequences: 237096
Number of extensions: 1225686
Number of successful extensions: 2508
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2503
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)