BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313F02f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z82053-9|CAJ85768.1| 189|Caenorhabditis elegans Hypothetical pr... 31 0.38 Z82053-8|CAB61018.2| 309|Caenorhabditis elegans Hypothetical pr... 31 0.38 Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical pr... 31 0.38 U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin ... 31 0.38 AF070968-1|AAD15926.1| 309|Caenorhabditis elegans PAR-6 protein. 31 0.38 Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 31 0.66 Z81492-6|CAB04034.1| 416|Caenorhabditis elegans Hypothetical pr... 31 0.66 U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 31 0.66 Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 30 1.2 Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical p... 29 1.5 U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 29 1.5 AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical ... 29 1.5 Z82052-3|CAB04826.1| 363|Caenorhabditis elegans Hypothetical pr... 29 2.7 Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 28 4.7 U21324-19|AAK68224.1| 407|Caenorhabditis elegans C-type lectin ... 28 4.7 Z83102-6|CAB05461.1| 417|Caenorhabditis elegans Hypothetical pr... 27 6.2 Z81542-6|CAE17834.1| 365|Caenorhabditis elegans Hypothetical pr... 27 6.2 AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical ... 27 6.2 Z82052-9|CAB04825.2| 338|Caenorhabditis elegans Hypothetical pr... 27 8.1 AF025452-1|AAB70944.1| 411|Caenorhabditis elegans C-type lectin... 27 8.1 AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 27 8.1 AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 27 8.1 AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical ... 27 8.1 >Z82053-9|CAJ85768.1| 189|Caenorhabditis elegans Hypothetical protein T26E3.3b protein. Length = 189 Score = 31.5 bits (68), Expect = 0.38 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +1 Query: 142 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 285 +T+K + R R + + T A E +A AA T + RP MKMNGS Sbjct: 123 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 169 >Z82053-8|CAB61018.2| 309|Caenorhabditis elegans Hypothetical protein T26E3.3a protein. Length = 309 Score = 31.5 bits (68), Expect = 0.38 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +1 Query: 142 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 285 +T+K + R R + + T A E +A AA T + RP MKMNGS Sbjct: 243 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 289 >Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical protein F49A5.2 protein. Length = 379 Score = 31.5 bits (68), Expect = 0.38 Identities = 13/36 (36%), Positives = 25/36 (69%) Frame = +3 Query: 213 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYI 320 A+ +C+ +C +LVS+ +++EN +V++ I D YI Sbjct: 267 AQTFCKTKCANLVSINSANENRYVQS-IYNDTNGYI 301 >U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin protein 5 protein. Length = 419 Score = 31.5 bits (68), Expect = 0.38 Identities = 18/72 (25%), Positives = 33/72 (45%) Frame = +3 Query: 75 NGRILEPPVPSLCVQRNIHERYADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVS 254 NG P +C + +ADN Y ++ L ++ A+ C Q C +L S Sbjct: 137 NGNCESDPRAFVC---ELPATHADNCTYNYNGHCFTLHTERNTFVQAQAICEQECGNLAS 193 Query: 255 LETSDENEWVKA 290 + +S+EN ++ + Sbjct: 194 IHSSNENRYLSS 205 >AF070968-1|AAD15926.1| 309|Caenorhabditis elegans PAR-6 protein. Length = 309 Score = 31.5 bits (68), Expect = 0.38 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +1 Query: 142 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 285 +T+K + R R + + T A E +A AA T + RP MKMNGS Sbjct: 243 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 289 >Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical protein F16H6.1 protein. Length = 555 Score = 30.7 bits (66), Expect = 0.66 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +3 Query: 213 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYI 320 A++ C+Q C +LVS+ + +EN +V++ + YI Sbjct: 189 AQSACQQECGNLVSIHSDEENNFVQSLFTTNSPTYI 224 >Z81492-6|CAB04034.1| 416|Caenorhabditis elegans Hypothetical protein E03H4.10 protein. Length = 416 Score = 30.7 bits (66), Expect = 0.66 Identities = 15/56 (26%), Positives = 29/56 (51%) Frame = +3 Query: 138 YADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARIVQD 305 +AD+ Y ++ E ++ A+ C + DLVS+ +S+EN +++ QD Sbjct: 157 HADDCTYNYNGYCYTFSSTAEPFIIAQTKCAETYGDLVSIHSSNENRYIETFAAQD 212 >U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical protein F10G2.3 protein. Length = 417 Score = 30.7 bits (66), Expect = 0.66 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = +3 Query: 195 EEDWLSARNYCRQRCMDLVSLETSDENEWV 284 E ++ A+N C Q C DL ++ T++EN ++ Sbjct: 175 EASFVVAQNTCEQFCGDLATIHTANENRYI 204 >Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein ZK512.5 protein. Length = 1232 Score = 29.9 bits (64), Expect = 1.2 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +3 Query: 63 AQFPNGRILEPPVPSLCVQRNIHERYADNKGYFFSWRDPALRGV 194 A PN + PPVP + ++ER A +KG+F S ++ ++ + Sbjct: 1053 ASIPNAKTTAPPVPQKQPELALNERKA-SKGWFGSIKEKVIKSI 1095 >Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical protein T20B3.16 protein. Length = 360 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/44 (29%), Positives = 27/44 (61%) Frame = +3 Query: 213 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCD 344 A+ +C+ +C ++VS+ +++EN +V++ I K YI + D Sbjct: 258 AQKFCKTKCANVVSINSANENRYVQS-IYYIKDGYITLGAAVLD 300 >U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical protein F32E10.3 protein. Length = 876 Score = 29.5 bits (63), Expect = 1.5 Identities = 9/33 (27%), Positives = 20/33 (60%) Frame = +3 Query: 186 RGVEEDWLSARNYCRQRCMDLVSLETSDENEWV 284 R +++WL+AR +C DL ++ ++ +W+ Sbjct: 62 RAGDQNWLTAREHCLSLNADLAAIRNVEQLDWI 94 >AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical protein Y102A5B.2 protein. Length = 355 Score = 29.5 bits (63), Expect = 1.5 Identities = 9/26 (34%), Positives = 20/26 (76%) Frame = +3 Query: 213 ARNYCRQRCMDLVSLETSDENEWVKA 290 A+ C+ RC +LVS+ +++EN ++++ Sbjct: 253 AQEICKTRCANLVSISSANENRFIRS 278 >Z82052-3|CAB04826.1| 363|Caenorhabditis elegans Hypothetical protein T25E12.8 protein. Length = 363 Score = 28.7 bits (61), Expect = 2.7 Identities = 8/27 (29%), Positives = 20/27 (74%) Frame = +3 Query: 207 LSARNYCRQRCMDLVSLETSDENEWVK 287 + A+ +C +C +LVS+ +++EN +++ Sbjct: 261 VEAQRFCNTKCANLVSIHSANENRFIQ 287 >Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical protein B0365.6 protein. Length = 545 Score = 27.9 bits (59), Expect = 4.7 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +3 Query: 225 CRQRCMDLVSLETSDENEWVKARIVQDKIKYI 320 C+Q C +LVS+ + +EN +V++ + YI Sbjct: 186 CQQACGNLVSIHSIEENNYVQSLFTTNAPTYI 217 >U21324-19|AAK68224.1| 407|Caenorhabditis elegans C-type lectin protein 6 protein. Length = 407 Score = 27.9 bits (59), Expect = 4.7 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = +3 Query: 153 GYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARI--VQDKIKYIWT 326 G+ +S+ PA + A+ C Q C +L S+ +S+EN ++ + I + +K YI Sbjct: 165 GHCYSFHQPAT------FAQAQVICEQECGNLASIHSSNENRYLSSIISSLSNKNYYIGA 218 Query: 327 S 329 S Sbjct: 219 S 219 >Z83102-6|CAB05461.1| 417|Caenorhabditis elegans Hypothetical protein C54C8.7 protein. Length = 417 Score = 27.5 bits (58), Expect = 6.2 Identities = 13/56 (23%), Positives = 28/56 (50%) Frame = +3 Query: 138 YADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARIVQD 305 +ADN + ++ + ++ A++ C Q C +L S+ + +EN ++ QD Sbjct: 158 FADNCLHNYNGYCYTFSSSPQTFIGAQSTCAQTCGNLASVHSPNENRYITTFAPQD 213 >Z81542-6|CAE17834.1| 365|Caenorhabditis elegans Hypothetical protein F49A5.9 protein. Length = 365 Score = 27.5 bits (58), Expect = 6.2 Identities = 9/26 (34%), Positives = 20/26 (76%) Frame = +3 Query: 213 ARNYCRQRCMDLVSLETSDENEWVKA 290 ++ +CR C +LVS+ +++EN +V++ Sbjct: 263 SQKFCRSICGNLVSITSANENRYVQS 288 >AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical protein Y102A5B.3 protein. Length = 355 Score = 27.5 bits (58), Expect = 6.2 Identities = 8/26 (30%), Positives = 18/26 (69%) Frame = +3 Query: 213 ARNYCRQRCMDLVSLETSDENEWVKA 290 A +C+ C ++VS+ + DE+ +V++ Sbjct: 256 AHEFCKPMCAEVVSINSGDESRYVQS 281 >Z82052-9|CAB04825.2| 338|Caenorhabditis elegans Hypothetical protein T25E12.7 protein. Length = 338 Score = 27.1 bits (57), Expect = 8.1 Identities = 8/24 (33%), Positives = 19/24 (79%) Frame = +3 Query: 213 ARNYCRQRCMDLVSLETSDENEWV 284 A+N+C ++C +LVS+ +++E ++ Sbjct: 235 AQNFCLEKCANLVSIHSANEVRFI 258 >AF025452-1|AAB70944.1| 411|Caenorhabditis elegans C-type lectin protein 2 protein. Length = 411 Score = 27.1 bits (57), Expect = 8.1 Identities = 9/25 (36%), Positives = 18/25 (72%) Frame = +3 Query: 210 SARNYCRQRCMDLVSLETSDENEWV 284 +A+ C + C +LVS+ +++EN +V Sbjct: 174 TAQTICEEECGNLVSIHSANENRYV 198 >AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical protein M151.2 protein. Length = 675 Score = 27.1 bits (57), Expect = 8.1 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 4/33 (12%) Frame = -3 Query: 93 APGCVHW--GTVRGPPPLA--QLIRVLMSSFSR 7 APG ++ G ++GPPPL+ QL +L+ +F+R Sbjct: 367 APGSLYGLEGMLQGPPPLSQDQLNSILLGAFTR 399 >AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical protein M151.3 protein. Length = 836 Score = 27.1 bits (57), Expect = 8.1 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 4/33 (12%) Frame = -3 Query: 93 APGCVHW--GTVRGPPPLA--QLIRVLMSSFSR 7 APG ++ G ++GPPPL+ QL +L+ +F+R Sbjct: 511 APGSLYGPEGLLQGPPPLSQDQLNSILLGAFTR 543 >AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical protein M151.7 protein. Length = 416 Score = 27.1 bits (57), Expect = 8.1 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 4/33 (12%) Frame = -3 Query: 93 APGCVHW--GTVRGPPPLA--QLIRVLMSSFSR 7 APG ++ G ++GPPPL+ QL +L+ +F+R Sbjct: 52 APGSLYGPEGLLQGPPPLSQDQLNSILLGAFTR 84 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,658,131 Number of Sequences: 27780 Number of extensions: 302637 Number of successful extensions: 851 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 815 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 851 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -