Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313F02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.36 
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    25   0.47 
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    25   0.47 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.47 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   0.82 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   0.82 
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    23   1.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.5  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   7.7  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   7.7  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   7.7  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   7.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.7  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
 Frame = +3

Query: 240 MDLVSLETSDEN--EWVKARIVQDKIKYIWTSGRLCDF-KGCNRP-----DLLPNEINGW 395
           + +V L+T+ E   EW K     +     W      +F KG N       D+  N +N W
Sbjct: 13  VSVVLLDTTQEEKLEWTKYPFGAEANTPGWVEESFTNFDKGINWRSYVVCDVAYNNVNNW 72

Query: 396 FWTAELQK 419
            WT  +++
Sbjct: 73  LWTPFIER 80


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 230 SAVVSCAQPVFFDAAERWVPP 168
           S  + C   +F +AA  WVPP
Sbjct: 12  SLALLCLHAIFVNAAPDWVPP 32


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 230 SAVVSCAQPVFFDAAERWVPP 168
           S  + C   +F +AA  WVPP
Sbjct: 12  SLALLCLHAIFVNAAPDWVPP 32


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
 Frame = +3

Query: 183 LRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARIVQ------DKIK--YIWTSGRL 338
           ++ +E+    A+    +  +DLV   TSD+++W +  I        +K K  YIW    +
Sbjct: 97  IKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIWVD-PV 155

Query: 339 CDFKGCNRPDLLPNE----INGWFWT 404
            D KG    D  PN      NG  WT
Sbjct: 156 KDDKGNPIKDKYPNNWLSVFNGTGWT 181


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +3

Query: 240 MDLVSLETSDENEWVK---ARIVQDKIKYIWTSGRLCDFK 350
           +D V   TSD++EW +     I      YIW  G++ + K
Sbjct: 118 LDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGK 157


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +3

Query: 240 MDLVSLETSDENEWVK---ARIVQDKIKYIWTSGRLCDFK 350
           +D V   TSD++EW +     I      YIW  G++ + K
Sbjct: 118 LDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGK 157


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 19/78 (24%), Positives = 34/78 (43%)
 Frame = +1

Query: 262 PAMKMNGSKRVLSRTR*STFGHRAVFVTSKDATDLTYYLTK*TVGSGLLSCRSWLPPPTV 441
           P  ++ G ++  S    ST  +  +    +    + YYL +  + SGL+   SW+    +
Sbjct: 186 PQFRVLGHRQRHSTIHLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWV-SFWL 244

Query: 442 NRTTGPKVAALENRNLIT 495
           NR   P   AL    ++T
Sbjct: 245 NRNATPARVALGVTTVLT 262


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 378 NEINGWFWTAELQKLA 425
           NE+N W+W  ++  L+
Sbjct: 361 NEMNKWWWNMKISNLS 376


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 209 ERKKLLPTTLHGPSISRDQ 265
           E +K + T L  PSI RDQ
Sbjct: 30  EERKNVDTVLVLPSIERDQ 48


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 142 LTIKDTSSRGGTQRSAASKKTG*AQETTAD 231
           LTI++  +R  T++S    +TG  Q+   D
Sbjct: 17  LTIEELKTRLHTEQSVCKTETGIDQQKAND 46


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 209 ERKKLLPTTLHGPSISRDQ 265
           E +K + T L  PSI RDQ
Sbjct: 30  EERKNVDTVLVLPSIERDQ 48


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 209 ERKKLLPTTLHGPSISRDQ 265
           E +K + T L  PSI RDQ
Sbjct: 30  EERKNVDTVLVLPSIERDQ 48


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 198 EDWLSARNYCRQR 236
           ED+LS   YCR R
Sbjct: 107 EDFLSVAVYCRDR 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,468
Number of Sequences: 438
Number of extensions: 3996
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)