Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313E12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.31 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   2.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 185 DAWC-STPFQNSSSFHSSRRTPAFSDKFPV 99
           DA C S   QNSSS  +  R   +S+KFP+
Sbjct: 33  DALCQSFRKQNSSSCGNGNRCDLWSEKFPI 62


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +1

Query: 301 FFCKIKDINYILEQCTNATYSISNSLIVGQLTSENVGSVSEL 426
           F  + KD+N  LE    +   I ++ ++ +L ++NV + +++
Sbjct: 132 FKIRYKDLNKALESSKISVGLIRDTAVLYRLLADNVANFNKI 173


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +2

Query: 53  IEANNGRRKTQNNSMRQETYQRTLEYVENCENWKSSEMVSSTT 181
           I+ N+G       +   ET+ + L  ++  E  +   M  S T
Sbjct: 493 IDLNSGDLSMLETNNLSETFTQNLSLMDESEGRQEPNMTDSLT 535


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,423
Number of Sequences: 336
Number of extensions: 2717
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)