Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313E12f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 33 0.026
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 0.73
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 27 1.3
SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr... 27 1.7
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.7
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 26 3.0
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 3.0
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 26 3.9
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip... 26 3.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 5.2
SPCC790.03 |||rhomboid family protease|Schizosaccharomyces pombe... 25 6.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 6.8
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 25 9.0
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 25 9.0
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 25 9.0
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 33.1 bits (72), Expect = 0.026
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 146 NWKSSEMVSSTTHPLQGDNMIVNDLQTSLSSFYEEN-QYLQMIQ*LLKCIINIFFVK 313
N+ S+ + S THP N I ND+ TS++S+ E Q I+ L C+ F K
Sbjct: 2062 NFVSTILTLSNTHPSIAGNPIFNDIWTSIASWTERRLQSCSQIEVTLPCVECFFKYK 2118
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.3 bits (60), Expect = 0.73
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 80 TQNNSMRQETYQRTLEYVENCENWKSSEMVSSTTHPLQGDNMIVNDLQTSLSSFYEENQ 256
+ N+S++ E +R +YV EN+ S + T Q + VN L + +EN+
Sbjct: 750 SSNSSLKSEIEERNNQYVTLRENFDSLQNAIMETFDKQVTHCSVNHLVQQIRKLKDENK 808
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 50 QIEANNGRRKTQNNSM--RQETYQRTLE 127
Q EANN ++ NNS+ +Q+ YQR LE
Sbjct: 102 QSEANNAALESLNNSIKQKQDEYQRKLE 129
>SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 322
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 331 ILEQCTNATYSISNSLIVGQLTSENVGSVSELNRSHQTIFNFQRNYTTCYKIS 489
+LEQ N+T ++ L + +S N+ VS L + F+F + K+S
Sbjct: 247 LLEQLNNSTDAVPKKLDASKASSLNLEKVSYLTDEPKFRFDFNNDEMAVVKLS 299
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 95 MRQETYQRTLEYVENCENWKSSEMVSSTTHPLQGDNMIVNDL 220
++ ETY + +EYV + + + T P D+ I+N L
Sbjct: 464 VKNETYWQAVEYVRRTSQDEGIDYALNYTDPKTNDSFILNGL 505
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 26.2 bits (55), Expect = 3.0
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 259 PPNDSIVA*VYY*YFFCKIKD-INYILEQCTNATYSISNSL--IVGQLTSENVGSVSELN 429
PP+D I V K+K+ +++ L++ + S +NS VG + S + S + LN
Sbjct: 3 PPDDQINNNVGSNSHLEKLKEAMDHQLQKSSKIVGSFTNSQNSSVGSVHSPILESPTSLN 62
Query: 430 RSHQTIFNF 456
R H+ F+F
Sbjct: 63 RQHRNSFSF 71
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 155 SSEMVSSTTHPL-QGDNMIVNDLQTSLSSFYEENQYL 262
+S V+S PL D++ +ND +L FYE+ YL
Sbjct: 187 NSSFVNSPFFPLPSSDDLFLNDRVINLFLFYEKFSYL 223
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 3.9
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 10 SAQRSPSLGHISV--ANRSEQRKTEDPKQFNETGNLSENAGVRREL*KLEEF*NGVEH 177
S S SL H + N+ +KT +FN S+ +GV EL + F G H
Sbjct: 118 SGADSTSLSHFTANEINKGNCKKTALSNEFNSANKGSKASGVGAELPSVNGFIEGELH 175
>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
antiporter Sod22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 1 PKQSAQRSPSLGHISVANRSEQRKTEDPKQFNETGNLSENAGVRR 135
P QR P+LGHI + E + +Q N +L EN+ RR
Sbjct: 626 PDDERQREPTLGHIE--SSIENHRPRYSRQ-NSESHLRENSVERR 667
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 54 SKRTTEDGRPKTIQ 95
+++TTEDG PKTI+
Sbjct: 2060 NEKTTEDGHPKTIK 2073
>SPCC790.03 |||rhomboid family protease|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 248
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 209 QSYYRLAGDAWCSTPFQNSSSFHSSRRTPAFSDKFPVSLNCF 84
+ Y +AG + + F ++S HS +R +F + F + CF
Sbjct: 118 KDYVSIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCF 159
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 197 DNMIVNDLQTSLSSFYEENQYLQM 268
DN VN QT +F+ NQYL++
Sbjct: 2132 DNFEVNIEQTLSKNFFGNNQYLKL 2155
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 23 VQVWDISQSQIEANNGRRKTQNNSMR 100
+QVWD++ +++ G Q N++R
Sbjct: 80 IQVWDVNTGKVDRRLGGHLAQINTIR 105
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 11 QPSEVQVWDISQSQIEANNGR---RKTQNNSMRQET-YQRTLEYVENCENWKSSEMVSST 178
Q +E +++++SQ E +K+ ++++ET ++ + CE+ S E +S
Sbjct: 442 QSNEQNFYELAESQNEQRVSALAAKKSGPAAIQEETSVSKSFNIIAKCEDTGSMEALSDY 501
Query: 179 THPLQ 193
PLQ
Sbjct: 502 LKPLQ 506
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 125 PAFSDKFPVSLNCFGSSVFRCSLRFATEICP 33
P F P + + G+ + C ++F TE+ P
Sbjct: 340 PGFGMPLPKNPSQRGNMIIECKVKFPTELTP 370
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,252,268
Number of Sequences: 5004
Number of extensions: 45752
Number of successful extensions: 158
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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