BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313E12f (521 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 33 0.026 SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 0.73 SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 27 1.3 SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr... 27 1.7 SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.7 SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 26 3.0 SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 3.0 SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 26 3.9 SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip... 26 3.9 SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 5.2 SPCC790.03 |||rhomboid family protease|Schizosaccharomyces pombe... 25 6.8 SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 6.8 SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 25 9.0 SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 25 9.0 SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 25 9.0 >SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 3655 Score = 33.1 bits (72), Expect = 0.026 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +2 Query: 146 NWKSSEMVSSTTHPLQGDNMIVNDLQTSLSSFYEEN-QYLQMIQ*LLKCIINIFFVK 313 N+ S+ + S THP N I ND+ TS++S+ E Q I+ L C+ F K Sbjct: 2062 NFVSTILTLSNTHPSIAGNPIFNDIWTSIASWTERRLQSCSQIEVTLPCVECFFKYK 2118 >SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1115 Score = 28.3 bits (60), Expect = 0.73 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = +2 Query: 80 TQNNSMRQETYQRTLEYVENCENWKSSEMVSSTTHPLQGDNMIVNDLQTSLSSFYEENQ 256 + N+S++ E +R +YV EN+ S + T Q + VN L + +EN+ Sbjct: 750 SSNSSLKSEIEERNNQYVTLRENFDSLQNAIMETFDKQVTHCSVNHLVQQIRKLKDENK 808 >SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual Length = 614 Score = 27.5 bits (58), Expect = 1.3 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%) Frame = +2 Query: 50 QIEANNGRRKTQNNSM--RQETYQRTLE 127 Q EANN ++ NNS+ +Q+ YQR LE Sbjct: 102 QSEANNAALESLNNSIKQKQDEYQRKLE 129 >SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr 3|||Manual Length = 322 Score = 27.1 bits (57), Expect = 1.7 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +1 Query: 331 ILEQCTNATYSISNSLIVGQLTSENVGSVSELNRSHQTIFNFQRNYTTCYKIS 489 +LEQ N+T ++ L + +S N+ VS L + F+F + K+S Sbjct: 247 LLEQLNNSTDAVPKKLDASKASSLNLEKVSYLTDEPKFRFDFNNDEMAVVKLS 299 >SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual Length = 583 Score = 27.1 bits (57), Expect = 1.7 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +2 Query: 95 MRQETYQRTLEYVENCENWKSSEMVSSTTHPLQGDNMIVNDL 220 ++ ETY + +EYV + + + T P D+ I+N L Sbjct: 464 VKNETYWQAVEYVRRTSQDEGIDYALNYTDPKTNDSFILNGL 505 >SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1639 Score = 26.2 bits (55), Expect = 3.0 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Frame = +1 Query: 259 PPNDSIVA*VYY*YFFCKIKD-INYILEQCTNATYSISNSL--IVGQLTSENVGSVSELN 429 PP+D I V K+K+ +++ L++ + S +NS VG + S + S + LN Sbjct: 3 PPDDQINNNVGSNSHLEKLKEAMDHQLQKSSKIVGSFTNSQNSSVGSVHSPILESPTSLN 62 Query: 430 RSHQTIFNF 456 R H+ F+F Sbjct: 63 RQHRNSFSF 71 >SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces pombe|chr 2|||Manual Length = 987 Score = 26.2 bits (55), Expect = 3.0 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +2 Query: 155 SSEMVSSTTHPL-QGDNMIVNDLQTSLSSFYEENQYL 262 +S V+S PL D++ +ND +L FYE+ YL Sbjct: 187 NSSFVNSPFFPLPSSDDLFLNDRVINLFLFYEKFSYL 223 >SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 391 Score = 25.8 bits (54), Expect = 3.9 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = +1 Query: 10 SAQRSPSLGHISV--ANRSEQRKTEDPKQFNETGNLSENAGVRREL*KLEEF*NGVEH 177 S S SL H + N+ +KT +FN S+ +GV EL + F G H Sbjct: 118 SGADSTSLSHFTANEINKGNCKKTALSNEFNSANKGSKASGVGAELPSVNGFIEGELH 175 >SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antiporter Sod22|Schizosaccharomyces pombe|chr 1|||Manual Length = 759 Score = 25.8 bits (54), Expect = 3.9 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +1 Query: 1 PKQSAQRSPSLGHISVANRSEQRKTEDPKQFNETGNLSENAGVRR 135 P QR P+LGHI + E + +Q N +L EN+ RR Sbjct: 626 PDDERQREPTLGHIE--SSIENHRPRYSRQ-NSESHLRENSVERR 667 >SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual Length = 4717 Score = 25.4 bits (53), Expect = 5.2 Identities = 9/14 (64%), Positives = 13/14 (92%) Frame = +3 Query: 54 SKRTTEDGRPKTIQ 95 +++TTEDG PKTI+ Sbjct: 2060 NEKTTEDGHPKTIK 2073 >SPCC790.03 |||rhomboid family protease|Schizosaccharomyces pombe|chr 3|||Manual Length = 248 Score = 25.0 bits (52), Expect = 6.8 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = -1 Query: 209 QSYYRLAGDAWCSTPFQNSSSFHSSRRTPAFSDKFPVSLNCF 84 + Y +AG + + F ++S HS +R +F + F + CF Sbjct: 118 KDYVSIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCF 159 >SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccharomyces pombe|chr 1|||Manual Length = 4196 Score = 25.0 bits (52), Expect = 6.8 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +2 Query: 197 DNMIVNDLQTSLSSFYEENQYLQM 268 DN VN QT +F+ NQYL++ Sbjct: 2132 DNFEVNIEQTLSKNFFGNNQYLKL 2155 >SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 297 Score = 24.6 bits (51), Expect = 9.0 Identities = 8/26 (30%), Positives = 16/26 (61%) Frame = +2 Query: 23 VQVWDISQSQIEANNGRRKTQNNSMR 100 +QVWD++ +++ G Q N++R Sbjct: 80 IQVWDVNTGKVDRRLGGHLAQINTIR 105 >SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual Length = 686 Score = 24.6 bits (51), Expect = 9.0 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = +2 Query: 11 QPSEVQVWDISQSQIEANNGR---RKTQNNSMRQET-YQRTLEYVENCENWKSSEMVSST 178 Q +E +++++SQ E +K+ ++++ET ++ + CE+ S E +S Sbjct: 442 QSNEQNFYELAESQNEQRVSALAAKKSGPAAIQEETSVSKSFNIIAKCEDTGSMEALSDY 501 Query: 179 THPLQ 193 PLQ Sbjct: 502 LKPLQ 506 >SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces pombe|chr 3|||Manual Length = 379 Score = 24.6 bits (51), Expect = 9.0 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = -1 Query: 125 PAFSDKFPVSLNCFGSSVFRCSLRFATEICP 33 P F P + + G+ + C ++F TE+ P Sbjct: 340 PGFGMPLPKNPSQRGNMIIECKVKFPTELTP 370 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,252,268 Number of Sequences: 5004 Number of extensions: 45752 Number of successful extensions: 158 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 158 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 212331630 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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