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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313E12f
         (521 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ...    33   0.026
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy...    28   0.73 
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual      27   1.3  
SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr...    27   1.7  
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual        27   1.7  
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces...    26   3.0  
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc...    26   3.0  
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo...    26   3.9  
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip...    26   3.9  
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        25   5.2  
SPCC790.03 |||rhomboid family protease|Schizosaccharomyces pombe...    25   6.8  
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha...    25   6.8  
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos...    25   9.0  
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch...    25   9.0  
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc...    25   9.0  

>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 3655

 Score = 33.1 bits (72), Expect = 0.026
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 146  NWKSSEMVSSTTHPLQGDNMIVNDLQTSLSSFYEEN-QYLQMIQ*LLKCIINIFFVK 313
            N+ S+ +  S THP    N I ND+ TS++S+ E   Q    I+  L C+   F  K
Sbjct: 2062 NFVSTILTLSNTHPSIAGNPIFNDIWTSIASWTERRLQSCSQIEVTLPCVECFFKYK 2118


>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1115

 Score = 28.3 bits (60), Expect = 0.73
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +2

Query: 80  TQNNSMRQETYQRTLEYVENCENWKSSEMVSSTTHPLQGDNMIVNDLQTSLSSFYEENQ 256
           + N+S++ E  +R  +YV   EN+ S +     T   Q  +  VN L   +    +EN+
Sbjct: 750 SSNSSLKSEIEERNNQYVTLRENFDSLQNAIMETFDKQVTHCSVNHLVQQIRKLKDENK 808


>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 614

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = +2

Query: 50  QIEANNGRRKTQNNSM--RQETYQRTLE 127
           Q EANN   ++ NNS+  +Q+ YQR LE
Sbjct: 102 QSEANNAALESLNNSIKQKQDEYQRKLE 129


>SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 322

 Score = 27.1 bits (57), Expect = 1.7
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 331 ILEQCTNATYSISNSLIVGQLTSENVGSVSELNRSHQTIFNFQRNYTTCYKIS 489
           +LEQ  N+T ++   L   + +S N+  VS L    +  F+F  +     K+S
Sbjct: 247 LLEQLNNSTDAVPKKLDASKASSLNLEKVSYLTDEPKFRFDFNNDEMAVVKLS 299


>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 583

 Score = 27.1 bits (57), Expect = 1.7
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 95  MRQETYQRTLEYVENCENWKSSEMVSSTTHPLQGDNMIVNDL 220
           ++ ETY + +EYV      +  +   + T P   D+ I+N L
Sbjct: 464 VKNETYWQAVEYVRRTSQDEGIDYALNYTDPKTNDSFILNGL 505


>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1639

 Score = 26.2 bits (55), Expect = 3.0
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +1

Query: 259 PPNDSIVA*VYY*YFFCKIKD-INYILEQCTNATYSISNSL--IVGQLTSENVGSVSELN 429
           PP+D I   V       K+K+ +++ L++ +    S +NS    VG + S  + S + LN
Sbjct: 3   PPDDQINNNVGSNSHLEKLKEAMDHQLQKSSKIVGSFTNSQNSSVGSVHSPILESPTSLN 62

Query: 430 RSHQTIFNF 456
           R H+  F+F
Sbjct: 63  RQHRNSFSF 71


>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 987

 Score = 26.2 bits (55), Expect = 3.0
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 155 SSEMVSSTTHPL-QGDNMIVNDLQTSLSSFYEENQYL 262
           +S  V+S   PL   D++ +ND   +L  FYE+  YL
Sbjct: 187 NSSFVNSPFFPLPSSDDLFLNDRVINLFLFYEKFSYL 223


>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 391

 Score = 25.8 bits (54), Expect = 3.9
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = +1

Query: 10  SAQRSPSLGHISV--ANRSEQRKTEDPKQFNETGNLSENAGVRREL*KLEEF*NGVEH 177
           S   S SL H +    N+   +KT    +FN     S+ +GV  EL  +  F  G  H
Sbjct: 118 SGADSTSLSHFTANEINKGNCKKTALSNEFNSANKGSKASGVGAELPSVNGFIEGELH 175


>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
           antiporter Sod22|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 759

 Score = 25.8 bits (54), Expect = 3.9
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 1   PKQSAQRSPSLGHISVANRSEQRKTEDPKQFNETGNLSENAGVRR 135
           P    QR P+LGHI   +  E  +    +Q N   +L EN+  RR
Sbjct: 626 PDDERQREPTLGHIE--SSIENHRPRYSRQ-NSESHLRENSVERR 667


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 25.4 bits (53), Expect = 5.2
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +3

Query: 54   SKRTTEDGRPKTIQ 95
            +++TTEDG PKTI+
Sbjct: 2060 NEKTTEDGHPKTIK 2073


>SPCC790.03 |||rhomboid family protease|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 248

 Score = 25.0 bits (52), Expect = 6.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 209 QSYYRLAGDAWCSTPFQNSSSFHSSRRTPAFSDKFPVSLNCF 84
           + Y  +AG +  +  F ++S  HS +R  +F + F +   CF
Sbjct: 118 KDYVSIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPAYCF 159


>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 4196

 Score = 25.0 bits (52), Expect = 6.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 197  DNMIVNDLQTSLSSFYEENQYLQM 268
            DN  VN  QT   +F+  NQYL++
Sbjct: 2132 DNFEVNIEQTLSKNFFGNNQYLKL 2155


>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 297

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 23  VQVWDISQSQIEANNGRRKTQNNSMR 100
           +QVWD++  +++   G    Q N++R
Sbjct: 80  IQVWDVNTGKVDRRLGGHLAQINTIR 105


>SPBC1271.15c |||translation initiation factor
           IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +2

Query: 11  QPSEVQVWDISQSQIEANNGR---RKTQNNSMRQET-YQRTLEYVENCENWKSSEMVSST 178
           Q +E   +++++SQ E        +K+   ++++ET   ++   +  CE+  S E +S  
Sbjct: 442 QSNEQNFYELAESQNEQRVSALAAKKSGPAAIQEETSVSKSFNIIAKCEDTGSMEALSDY 501

Query: 179 THPLQ 193
             PLQ
Sbjct: 502 LKPLQ 506


>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 379

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 125 PAFSDKFPVSLNCFGSSVFRCSLRFATEICP 33
           P F    P + +  G+ +  C ++F TE+ P
Sbjct: 340 PGFGMPLPKNPSQRGNMIIECKVKFPTELTP 370


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,252,268
Number of Sequences: 5004
Number of extensions: 45752
Number of successful extensions: 158
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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