BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313E12f (521 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 25 2.0 AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 25 2.0 AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 24 3.6 AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 6.2 AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 23 8.2 >AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. Length = 3361 Score = 24.6 bits (51), Expect = 2.0 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = +1 Query: 313 IKDINYILEQCTNATYSISNSLIVGQLTSENVGSVSELNRSHQTIFN 453 I+ N IL+ CTN + + + V S+SE R I+N Sbjct: 2386 IEGSNMILKACTNLKEEMMKQKLFSESADAPVASLSEGFRKALQIYN 2432 >AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein protein. Length = 468 Score = 24.6 bits (51), Expect = 2.0 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +2 Query: 209 VNDLQTSLSSFYEENQYLQMIQ*LLKCIINIFFVKSR 319 V DLQ SL++ EE L ++ L+ I+I KSR Sbjct: 49 VEDLQRSLAAEKEEKMKLTVLLQELQAQISIMMKKSR 85 >AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. Length = 3398 Score = 23.8 bits (49), Expect = 3.6 Identities = 12/43 (27%), Positives = 19/43 (44%) Frame = +2 Query: 86 NNSMRQETYQRTLEYVENCENWKSSEMVSSTTHPLQGDNMIVN 214 NN R + + ++ + NW +EM TTH G + N Sbjct: 1412 NNQKRVQLTGAKVHHIMS--NWCYAEMTIDTTHTADGSKLSFN 1452 >AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase protein. Length = 1022 Score = 23.0 bits (47), Expect = 6.2 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = +2 Query: 101 QETYQRTLEYVENCENWKSSEMVSSTTHP 187 ++ YQR L+ +NWK +V S P Sbjct: 441 KKVYQRCLDTGVFPDNWKKQRLVLSIPKP 469 >AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein protein. Length = 942 Score = 22.6 bits (46), Expect = 8.2 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = -1 Query: 389 CPTISELEIEYVALVH-CSSM*FMSLILQ 306 C T+S E EYVAL C + ++ +++ Sbjct: 822 CVTLSSTEAEYVALAEACRELLWLQKLMK 850 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 553,404 Number of Sequences: 2352 Number of extensions: 11440 Number of successful extensions: 31 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 31 length of database: 563,979 effective HSP length: 60 effective length of database: 422,859 effective search space used: 47783067 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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