Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313E12f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125963-2|AAD14743.1|  463|Caenorhabditis elegans Hypothetical ...    31   0.66 
U61957-3|AAX55702.1|  395|Caenorhabditis elegans Temporarily ass...    28   4.7  
Z81051-5|CAB02866.1|  250|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z70307-13|CAA94339.1|  354|Caenorhabditis elegans Hypothetical p...    27   6.2  
U23448-8|AAL27226.1|  849|Caenorhabditis elegans Dnaj domain (pr...    27   8.1  
U23448-7|AAM81128.1|  868|Caenorhabditis elegans Dnaj domain (pr...    27   8.1  
U23448-6|AAL27225.1|  915|Caenorhabditis elegans Dnaj domain (pr...    27   8.1  
U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain (pr...    27   8.1  

>AF125963-2|AAD14743.1|  463|Caenorhabditis elegans Hypothetical
           protein Y38A10A.2 protein.
          Length = 463

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 19/67 (28%), Positives = 36/67 (53%)
 Frame = +1

Query: 304 FCKIKDINYILEQCTNATYSISNSLIVGQLTSENVGSVSELNRSHQTIFNFQRNYTTCYK 483
           FC   D    +E+  N T++I+  L   ++ S+ + + S +   H+T +  +RNYT+ Y 
Sbjct: 322 FCLCMDRKMDIEREYNQTFAIAQRLY-DKMESDILSNYSCM---HETTWIEERNYTSVYN 377

Query: 484 ISRKKCN 504
           ++ K  N
Sbjct: 378 LNEKVLN 384


>U61957-3|AAX55702.1|  395|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 49, isoform a protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +2

Query: 23  VQVWDISQSQIEANNGRRKTQNNSMRQETYQ--RTLEYVENC 142
           V++W +SQS++E +  +  TQ  S   +  Q  RTL  V  C
Sbjct: 238 VKIWSLSQSRVELDETKMATQKVSPNTQLSQLMRTLIIVVAC 279


>Z81051-5|CAB02866.1|  250|Caenorhabditis elegans Hypothetical
           protein C55A6.6 protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 376 LIVGQLTSENVGSVSELNRSHQTIFNFQRNYT 471
           L V Q TSE V S ++L+ SH   + FQRN T
Sbjct: 216 LTVEQSTSELVSSFNKLDNSHNGRY-FQRNLT 246


>Z70307-13|CAA94339.1|  354|Caenorhabditis elegans Hypothetical
           protein C39E9.13 protein.
          Length = 354

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 101 QETYQRTLE-YVENCENWKSSEMVSSTTHPLQGDNMIVN 214
           Q   +RT+E Y  NC+   S E +S    PLQ   +I+N
Sbjct: 147 QHGLRRTMEKYANNCKIVLSCESLSRIIEPLQSRCIIIN 185


>U23448-8|AAL27226.1|  849|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform b
           protein.
          Length = 849

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +2

Query: 5   NNQPSEVQVWDISQSQIEANNGRR-KTQNNSMRQ 103
           N+QP E+Q  ++S + ++ N+ +  +T+NN  R+
Sbjct: 350 NHQPDELQRKELSSADLKLNDSKAVRTKNNDHRE 383


>U23448-7|AAM81128.1|  868|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform d
           protein.
          Length = 868

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +2

Query: 5   NNQPSEVQVWDISQSQIEANNGRR-KTQNNSMRQ 103
           N+QP E+Q  ++S + ++ N+ +  +T+NN  R+
Sbjct: 350 NHQPDELQRKELSSADLKLNDSKAVRTKNNDHRE 383


>U23448-6|AAL27225.1|  915|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform a
           protein.
          Length = 915

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +2

Query: 5   NNQPSEVQVWDISQSQIEANNGRR-KTQNNSMRQ 103
           N+QP E+Q  ++S + ++ N+ +  +T+NN  R+
Sbjct: 350 NHQPDELQRKELSSADLKLNDSKAVRTKNNDHRE 383


>U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform c
           protein.
          Length = 912

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +2

Query: 5   NNQPSEVQVWDISQSQIEANNGRR-KTQNNSMRQ 103
           N+QP E+Q  ++S + ++ N+ +  +T+NN  R+
Sbjct: 349 NHQPDELQRKELSSADLKLNDSKAVRTKNNDHRE 382


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,396,475
Number of Sequences: 27780
Number of extensions: 252576
Number of successful extensions: 764
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)