BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313E11f (521 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 23 1.6 AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 23 1.6 AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 22 2.9 EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 21 6.6 EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6 EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6 EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6 EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6 EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6 EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 8.7 AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 21 8.7 AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 21 8.7 >AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor candidate 55 protein. Length = 402 Score = 23.0 bits (47), Expect = 1.6 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -1 Query: 143 TVPLAVCNVIPNFLDVLHIFVKVY 72 TVP+ VC ++ +V+ I++ VY Sbjct: 285 TVPMIVCPIVWLMDEVVEIYLLVY 308 >AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor candidate 11 protein. Length = 344 Score = 23.0 bits (47), Expect = 1.6 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -1 Query: 143 TVPLAVCNVIPNFLDVLHIFVKVY 72 TVP+ VC ++ +V+ I++ VY Sbjct: 285 TVPMIVCPIVWLMDEVVEIYLLVY 308 >AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor candidate 15 protein. Length = 455 Score = 22.2 bits (45), Expect = 2.9 Identities = 7/19 (36%), Positives = 12/19 (63%) Frame = -2 Query: 358 FVTKKHTSKSWLFSIPNLL 302 F+T+ + +WLF + N L Sbjct: 233 FITEHESKPNWLFFLANFL 251 >EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase protein. Length = 475 Score = 21.0 bits (42), Expect = 6.6 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = +3 Query: 417 TELCNFTNLKDVKSVYKLNNL 479 T C F NL+++ V NN+ Sbjct: 246 TSSCTFDNLEELGPVCNSNNI 266 >EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 311 Score = 21.0 bits (42), Expect = 6.6 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +3 Query: 78 LYKNVQNIEEIRNHITNGEW 137 L N ++ ++ + ITNGEW Sbjct: 158 LVLNSESGGDLSDFITNGEW 177 >EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 311 Score = 21.0 bits (42), Expect = 6.6 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +3 Query: 78 LYKNVQNIEEIRNHITNGEW 137 L N ++ ++ + ITNGEW Sbjct: 158 LVLNSESGGDLSDFITNGEW 177 >EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 311 Score = 21.0 bits (42), Expect = 6.6 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +3 Query: 78 LYKNVQNIEEIRNHITNGEW 137 L N ++ ++ + ITNGEW Sbjct: 158 LVLNSESGGDLSDFITNGEW 177 >EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 311 Score = 21.0 bits (42), Expect = 6.6 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +3 Query: 78 LYKNVQNIEEIRNHITNGEW 137 L N ++ ++ + ITNGEW Sbjct: 158 LVLNSESGGDLSDFITNGEW 177 >EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 311 Score = 21.0 bits (42), Expect = 6.6 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +3 Query: 78 LYKNVQNIEEIRNHITNGEW 137 L N ++ ++ + ITNGEW Sbjct: 158 LVLNSESGGDLSDFITNGEW 177 >EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase 2A protein. Length = 535 Score = 20.6 bits (41), Expect = 8.7 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -1 Query: 164 QARLNNCTVPLAVCNVIPNF 105 + ++NNC V V+PNF Sbjct: 90 KTKVNNCDVIEKPRKVLPNF 109 >AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. Length = 301 Score = 20.6 bits (41), Expect = 8.7 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = -3 Query: 216 LRQLLCSPPQPLEMDLRS 163 LR+ C P +PL +D ++ Sbjct: 180 LREERCDPDRPLPLDQKA 197 >AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface protein chaoptin protein. Length = 782 Score = 20.6 bits (41), Expect = 8.7 Identities = 7/12 (58%), Positives = 11/12 (91%) Frame = +3 Query: 63 TLKIYLYKNVQN 98 TLKI +Y+N++N Sbjct: 566 TLKIGVYRNIKN 577 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 121,279 Number of Sequences: 336 Number of extensions: 2725 Number of successful extensions: 12 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 12573240 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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