Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313E11f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 23 1.6
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 23 1.6
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 22 2.9
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 21 6.6
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 8.7
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 21 8.7
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 21 8.7
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 23.0 bits (47), Expect = 1.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 143 TVPLAVCNVIPNFLDVLHIFVKVY 72
TVP+ VC ++ +V+ I++ VY
Sbjct: 285 TVPMIVCPIVWLMDEVVEIYLLVY 308
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 23.0 bits (47), Expect = 1.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 143 TVPLAVCNVIPNFLDVLHIFVKVY 72
TVP+ VC ++ +V+ I++ VY
Sbjct: 285 TVPMIVCPIVWLMDEVVEIYLLVY 308
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 22.2 bits (45), Expect = 2.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -2
Query: 358 FVTKKHTSKSWLFSIPNLL 302
F+T+ + +WLF + N L
Sbjct: 233 FITEHESKPNWLFFLANFL 251
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 417 TELCNFTNLKDVKSVYKLNNL 479
T C F NL+++ V NN+
Sbjct: 246 TSSCTFDNLEELGPVCNSNNI 266
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 78 LYKNVQNIEEIRNHITNGEW 137
L N ++ ++ + ITNGEW
Sbjct: 158 LVLNSESGGDLSDFITNGEW 177
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 78 LYKNVQNIEEIRNHITNGEW 137
L N ++ ++ + ITNGEW
Sbjct: 158 LVLNSESGGDLSDFITNGEW 177
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 78 LYKNVQNIEEIRNHITNGEW 137
L N ++ ++ + ITNGEW
Sbjct: 158 LVLNSESGGDLSDFITNGEW 177
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 78 LYKNVQNIEEIRNHITNGEW 137
L N ++ ++ + ITNGEW
Sbjct: 158 LVLNSESGGDLSDFITNGEW 177
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 78 LYKNVQNIEEIRNHITNGEW 137
L N ++ ++ + ITNGEW
Sbjct: 158 LVLNSESGGDLSDFITNGEW 177
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 20.6 bits (41), Expect = 8.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 164 QARLNNCTVPLAVCNVIPNF 105
+ ++NNC V V+PNF
Sbjct: 90 KTKVNNCDVIEKPRKVLPNF 109
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -3
Query: 216 LRQLLCSPPQPLEMDLRS 163
LR+ C P +PL +D ++
Sbjct: 180 LREERCDPDRPLPLDQKA 197
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3
Query: 63 TLKIYLYKNVQN 98
TLKI +Y+N++N
Sbjct: 566 TLKIGVYRNIKN 577
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,279
Number of Sequences: 336
Number of extensions: 2725
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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