Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313E11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039041-3|AAB94192.1|  183|Caenorhabditis elegans Hypothetical ...    78   3e-15
AC006696-3|AAF39984.1|  391|Caenorhabditis elegans Hypothetical ...    30   1.2  
AC024757-1|AAF59450.3|  490|Caenorhabditis elegans Hypothetical ...    29   2.0  
AL110477-5|CAB54329.1|  314|Caenorhabditis elegans Hypothetical ...    28   3.5  
Z99276-2|CAB16482.1|  388|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U00049-6|AAM22030.1|  711|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AL023843-2|CAA19523.1|  388|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z99281-51|CAE18031.2|  281|Caenorhabditis elegans Hypothetical p...    27   6.2  
AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical...    27   6.2  
AL021497-19|CAA16406.2|  989|Caenorhabditis elegans Hypothetical...    27   6.2  
AF025472-3|AAB71075.2|  843|Caenorhabditis elegans Hypothetical ...    27   6.2  
AF025472-1|AAY43980.1|  832|Caenorhabditis elegans Hypothetical ...    27   8.1  

>AF039041-3|AAB94192.1|  183|Caenorhabditis elegans Hypothetical
           protein W03F8.4 protein.
          Length = 183

 Score = 78.2 bits (184), Expect = 3e-15
 Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
 Frame = +3

Query: 57  KTTLKIYLYKNVQNIEEIRNHITNGEWNCAIIKPSLILDPFQXXXXXXXXXXXXKFSTMV 236
           + T ++ L+K+V+N  E+   +  G+ + A+I+  L+L+PF               + M 
Sbjct: 19  RKTCRVCLFKDVKNAAELSQQLKEGKIDAALIRAELVLEPFVLLAAANRAVHQSAHNRMS 78

Query: 237 TRTVFGEILYNLSLTKNITQSLSKFGI-EKSHDLLVCFLVTNEIDCRPEILPEIKGEQCS 413
            R++  E++Y+LS ++NIT SL  FGI E S  ++      +      ++   IKG    
Sbjct: 79  CRSLAAELVYSLSPSRNITDSLVTFGIAEHSTAIIAAIFDDDSGKAMKKLAKAIKGTPVP 138

Query: 414 ITE-LCNFTNLKDVKSVYKLNN-LKSDEGLLDIIVSRM 521
           + E L  F N+  +K VY++ N    +EGL D IVSRM
Sbjct: 139 LMEGLPKFANVNMIKKVYQVGNPAFVEEGLSDHIVSRM 176


>AC006696-3|AAF39984.1|  391|Caenorhabditis elegans Hypothetical
           protein W08E12.7 protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 267 NLSLTKNITQSLSKFGIEKSHDLLVCFLVTNEIDCRPEIL 386
           N ++TKNI ++ ++FG+    ++L   L  NEID   +I+
Sbjct: 174 NTTITKNIDKTAAEFGLTPIENMLSHQLERNEIDGEKKII 213


>AC024757-1|AAF59450.3|  490|Caenorhabditis elegans Hypothetical
           protein Y37E11AL.5 protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
 Frame = -1

Query: 422 FCNRTLFTFYFGKYFRSAIYFICN*EAYE*IMAFFYSKLA*TLCYIFGKR*IVQ-NFSEH 246
           FC+  L  F+F ++   AI+F C  + +  ++AFF++       Y+F  R ++Q  F  +
Sbjct: 351 FCS-ALLLFFFREHSPMAIFFFCLFQFFHVVIAFFFAS------YLFRLRFLLQRGFDSN 403

Query: 245 SSRNHCTKFRCDNCSVRRHSHLK 177
            S +   + R  + ++  H   K
Sbjct: 404 DSTDSLERKRDISRALLEHVDTK 426


>AL110477-5|CAB54329.1|  314|Caenorhabditis elegans Hypothetical
           protein Y113G7B.7 protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +3

Query: 372 RPEILPEIKGEQCSITELCNFTNLKDVKSVYKLNNLKSDEGL 497
           +P +L EI G +C    L NFTN+ +V ++++L   K  + L
Sbjct: 178 KPRVLEEI-GIRC----LANFTNISEVSNLFELEQWKKAKSL 214


>Z99276-2|CAB16482.1|  388|Caenorhabditis elegans Hypothetical
           protein Y52D3.1a protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 346 KHTSKSWLFSIPNLLKLCVIFLVSDKLYKISP 251
           K +S   L   PN+++LC  F+    +Y+I+P
Sbjct: 97  KESSNLRLMHHPNIIELCECFVYERSIYQITP 128


>U00049-6|AAM22030.1|  711|Caenorhabditis elegans Hypothetical
           protein C18F10.2 protein.
          Length = 711

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 269 IVQNFSEHSSRNHCTKFRCDNCSVRRHSHLKWI*DQARLN 150
           I Q F EH       K RC+NC+   +  +  + DQ +++
Sbjct: 285 IGQFFGEHPRSKRTPKPRCENCTEEEYEDVTPLSDQVKMD 324


>AL023843-2|CAA19523.1|  388|Caenorhabditis elegans Hypothetical
           protein Y52D3.1a protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 346 KHTSKSWLFSIPNLLKLCVIFLVSDKLYKISP 251
           K +S   L   PN+++LC  F+    +Y+I+P
Sbjct: 97  KESSNLRLMHHPNIIELCECFVYERSIYQITP 128


>Z99281-51|CAE18031.2|  281|Caenorhabditis elegans Hypothetical
           protein Y57G11C.48 protein.
          Length = 281

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +3

Query: 333 LLVCFLVTNEIDCRPEILPE---IKGEQCSITELCNFTNLKDVKSVY 464
           L+ CFL +NE + +  +LP+   I     +I +L   +N K + S++
Sbjct: 184 LIECFLYSNETNLKTIVLPKLIVITDAITAIVQLLRVSNTKSLSSIH 230


>AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical
           protein Y51A2D.7b protein.
          Length = 1057

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 175 HFKWLWRRTEQLSQRNLVQWLRELCSEKFCT 267
           HF W+W     L Q +++  L E  +E+F T
Sbjct: 212 HFSWIWLHIATLLQGSIITHLLESGAEQFRT 242


>AL021497-19|CAA16406.2|  989|Caenorhabditis elegans Hypothetical
           protein Y51A2D.7a protein.
          Length = 989

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 175 HFKWLWRRTEQLSQRNLVQWLRELCSEKFCT 267
           HF W+W     L Q +++  L E  +E+F T
Sbjct: 212 HFSWIWLHIATLLQGSIITHLLESGAEQFRT 242


>AF025472-3|AAB71075.2|  843|Caenorhabditis elegans Hypothetical
           protein ZK250.6 protein.
          Length = 843

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 15  MKLEHFTCVLDPETKTTLKIYLYKNVQNIEEIRNHITNGE 134
           +K+ +  C+     KT +     +NV NI E   ++TN E
Sbjct: 389 IKISNVPCIAPKNLKTFMLNQTVRNVSNIREGNKYLTNTE 428


>AF025472-1|AAY43980.1|  832|Caenorhabditis elegans Hypothetical
           protein ZK250.5b protein.
          Length = 832

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 15  MKLEHFTCVLDPETKTTLKIYLYKNVQNIEEIRNHITNGE 134
           +K+ + TC+     KT +     +NV NI E   + TN E
Sbjct: 63  IKISNITCIARKNLKTFMLNKTVRNVSNIREGSRYHTNTE 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,565,381
Number of Sequences: 27780
Number of extensions: 237117
Number of successful extensions: 670
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)