Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313E07f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035251-1|AAH35251.1| 1031|Homo sapiens coiled-coil domain cont... 33 0.61
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 31 3.2
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 31 3.2
M77810-1|AAA35869.1| 474|Homo sapiens transcription factor GATA... 29 9.9
M68891-1|AAA35868.1| 480|Homo sapiens GATA-binding protein prot... 29 9.9
BT006671-1|AAP35317.1| 480|Homo sapiens hypothetical protein MG... 29 9.9
BC051342-1|AAH51342.1| 480|Homo sapiens GATA binding protein 2 ... 29 9.9
BC015613-1|AAH15613.1| 480|Homo sapiens GATA binding protein 2 ... 29 9.9
BC014432-1|AAH14432.1| 360|Homo sapiens PDZRN3 protein protein. 29 9.9
BC002557-1|AAH02557.1| 480|Homo sapiens GATA binding protein 2 ... 29 9.9
AB029018-1|BAA83047.1| 1098|Homo sapiens KIAA1095 protein protein. 29 9.9
>BC035251-1|AAH35251.1| 1031|Homo sapiens coiled-coil domain
containing 40 protein.
Length = 1031
Score = 33.1 bits (72), Expect = 0.61
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -1
Query: 446 CTQQS*RYHQPRADCTRPSRRH---RHGSRAGTCCRRCEDPLLCTQRRI*DERDSRR 285
CT + R Q RA TR +RRH +HG+RAGTC Q R RD+RR
Sbjct: 968 CTNNTGRA-QARARTTRDARRHVHEQHGTRAGTCTNNTGR----AQARARTTRDARR 1019
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 177 IWWWAGA*CG*CSCP*LVCNTMLW 106
+WWW G CG CSC L + LW
Sbjct: 129 LWWWTGCSCG-CSC--LCASWALW 149
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 30.7 bits (66), Expect = 3.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 177 IWWWAGA*CG*CSCP*LVCNTMLW 106
+WWW G CG CSC L + LW
Sbjct: 129 LWWWTGCSCG-CSC--LCASWALW 149
>M77810-1|AAA35869.1| 474|Homo sapiens transcription factor GATA-2
protein.
Length = 474
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 398 RPSRRHRHGSRAGTCCRRCEDPLLCTQRR 312
+P RR RAGTCC C+ RR
Sbjct: 328 KPKRRLSAARRAGTCCANCQTTTTTLWRR 356
>M68891-1|AAA35868.1| 480|Homo sapiens GATA-binding protein
protein.
Length = 480
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 398 RPSRRHRHGSRAGTCCRRCEDPLLCTQRR 312
+P RR RAGTCC C+ RR
Sbjct: 334 KPKRRLSAARRAGTCCANCQTTTTTLWRR 362
>BT006671-1|AAP35317.1| 480|Homo sapiens hypothetical protein
MGC2306 protein.
Length = 480
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 398 RPSRRHRHGSRAGTCCRRCEDPLLCTQRR 312
+P RR RAGTCC C+ RR
Sbjct: 334 KPKRRLSAARRAGTCCANCQTTTTTLWRR 362
>BC051342-1|AAH51342.1| 480|Homo sapiens GATA binding protein 2
protein.
Length = 480
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 398 RPSRRHRHGSRAGTCCRRCEDPLLCTQRR 312
+P RR RAGTCC C+ RR
Sbjct: 334 KPKRRLSAARRAGTCCANCQTTTTTLWRR 362
>BC015613-1|AAH15613.1| 480|Homo sapiens GATA binding protein 2
protein.
Length = 480
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 398 RPSRRHRHGSRAGTCCRRCEDPLLCTQRR 312
+P RR RAGTCC C+ RR
Sbjct: 334 KPKRRLSAARRAGTCCANCQTTTTTLWRR 362
>BC014432-1|AAH14432.1| 360|Homo sapiens PDZRN3 protein protein.
Length = 360
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 164 LERDVADVHVRDSCVIRCFGMKPHGCGRVL-HG 69
L RDV + H+RD+C R G GCG L HG
Sbjct: 122 LRRDV-EAHMRDACDARPVGRCQEGCGLPLTHG 153
>BC002557-1|AAH02557.1| 480|Homo sapiens GATA binding protein 2
protein.
Length = 480
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 398 RPSRRHRHGSRAGTCCRRCEDPLLCTQRR 312
+P RR RAGTCC C+ RR
Sbjct: 334 KPKRRLSAARRAGTCCANCQTTTTTLWRR 362
>AB029018-1|BAA83047.1| 1098|Homo sapiens KIAA1095 protein protein.
Length = 1098
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 164 LERDVADVHVRDSCVIRCFGMKPHGCGRVL-HG 69
L RDV + H+RD+C R G GCG L HG
Sbjct: 154 LRRDV-EAHMRDACDARPVGRCQEGCGLPLTHG 185
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,067,424
Number of Sequences: 237096
Number of extensions: 1186253
Number of successful extensions: 2712
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2712
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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