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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313E03f
         (521 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)                  245   2e-65
SB_54147| Best HMM Match : No HMM Matches (HMM E-Value=.)             113   8e-26
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)                      99   2e-21
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)               78   5e-15
SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1)             59   2e-09
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)                  50   1e-06
SB_59319| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.0  
SB_50789| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.1  
SB_8887| Best HMM Match : G-patch (HMM E-Value=1.2e-08)                28   4.1  
SB_13397| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.1  
SB_20714| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.1  
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)                 27   9.4  
SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  

>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
          Length = 531

 Score =  245 bits (599), Expect = 2e-65
 Identities = 122/173 (70%), Positives = 143/173 (82%)
 Frame = +1

Query: 1   AKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG 180
           A++AL  A+ DH  +  +   R DL NIARTTLSSKIL  H++HF KLAVDAVLRLKGSG
Sbjct: 134 AEKALEAAAVDHSSDPEK--FREDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRLKGSG 191

Query: 181 NLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGS 360
           +L AIQIIK  GG + +SFLDEGFLL+KK+GV+QPKK+ENA ILIANTPMD DKIKVFGS
Sbjct: 192 DLNAIQIIKKLGGGMVDSFLDEGFLLDKKIGVNQPKKIENAKILIANTPMDADKIKVFGS 251

Query: 361 TIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADA 519
            ++VDS AKIA+LE+AEK+KMK+KV  I+ H  N FINRQLIYNYPEQLFADA
Sbjct: 252 RVRVDSTAKIADLEMAEKQKMKEKVEMIIKHDINCFINRQLIYNYPEQLFADA 304


>SB_54147| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 74

 Score =  113 bits (272), Expect = 8e-26
 Identities = 51/73 (69%), Positives = 62/73 (84%)
 Frame = +1

Query: 256 LNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKV 435
           ++KK+GV+QPKK+ENA ILIANTPMD DK+KVFGS ++VDS AKIAELE AEK+KMKDKV
Sbjct: 1   MDKKIGVNQPKKIENAKILIANTPMDADKVKVFGSRVRVDSTAKIAELEKAEKQKMKDKV 60

Query: 436 NKILAHKCNVFIN 474
             I+ H  N F+N
Sbjct: 61  EMIIKHGINCFVN 73


>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
          Length = 144

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 53/83 (63%), Positives = 63/83 (75%)
 Frame = +1

Query: 1   AKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG 180
           A++AL  A+ DH  +  +   R DL NIARTTLSSKIL  H++HF KLAVDAVLRLKGSG
Sbjct: 52  AEKALEAAAVDHSSDPEK--FRDDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRLKGSG 109

Query: 181 NLKAIQIIKISGGLLEESFLDEG 249
           +L AIQIIK  GG + +SFLDEG
Sbjct: 110 DLNAIQIIKKLGGGMVDSFLDEG 132


>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 175

 Score = 77.8 bits (183), Expect = 5e-15
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
 Frame = +1

Query: 34  HQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKIS 213
           H K  +   +R  LE  A T LSSK+++  KE F K+ VDAV+ L     L  I + K+S
Sbjct: 11  HVKKNDAGEMRQLLERCAATALSSKLIATQKEFFAKMVVDAVMMLDELLPLDMIGMKKVS 70

Query: 214 GGLLEESFLDEGFLLNKKVGV----HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSM 381
           GG LE+S L EG    K         QPK   +  I + N  ++  K +   + +++D++
Sbjct: 71  GGALEDSMLIEGVAFKKTFSYAGFEMQPKTYNHCKIALLNVELEL-KAEKENAEVRLDNV 129

Query: 382 AKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFAD 516
                +  AE + + DK++K++     V +++  I +   Q FAD
Sbjct: 130 KDYQSIVDAEWDILYDKLDKVVKSGAKVVLSKLPIGDVATQYFAD 174


>SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1)
          Length = 131

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
 Frame = +1

Query: 85  ARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN-------LKAIQIIKISGGLLEESFLD 243
           A T LSSK++    + F  + VDAV+ +K +GN       +KAI ++K  GG  +ES L 
Sbjct: 17  ANTALSSKLIGQQGDFFANMIVDAVMAVKRTGNKGEAKYPIKAINVLKAHGGSAKESILV 76

Query: 244 EGFLLNKKVGVH-QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKI 390
           +G+ LN  +     PK+V NA I   +  +   K+ + G ++ VD   K+
Sbjct: 77  DGYALNCTIASQAMPKQVTNAKIACLDFTLQKAKMHL-GVSVVVDDPEKL 125


>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
          Length = 505

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
 Frame = +1

Query: 85  ARTTLSSKILSNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISGGLLEESFLDEGF 252
           A TTL SKI+S       ++AVDAVL +    +   + + I++    GG L+++ L +G 
Sbjct: 167 AMTTLGSKIVSRCHRPLAEIAVDAVLSVADLERKDVDFELIKVEGKEGGKLDDTVLVKGV 226

Query: 253 LLNKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKD 429
           +++K +   Q PK V++A I I   P +  K K     + V ++    +L+  E+EK  +
Sbjct: 227 VVDKDMSHPQMPKVVKDAKIAILTCPFEPPKPKT-KHKLDVATVEDYKKLQEYEREKFTE 285

Query: 430 KVNKILAHKCNVFI 471
            + ++     N+ I
Sbjct: 286 MIKQVKDTGANLAI 299


>SB_59319| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 28

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +1

Query: 349 VFGSTIKVDSMAKIAELEVAEKEKMKDK 432
           VFGS ++VDS AKIA +E  +K K   K
Sbjct: 1   VFGSRVRVDSTAKIAGVESRKKWKRTPK 28


>SB_50789| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 777

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 20/63 (31%), Positives = 34/63 (53%)
 Frame = +1

Query: 28  FDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIK 207
           F  Q  LN A L V L+NIAR   + +I  + +E F +   D +L ++ S + +  ++ +
Sbjct: 68  FFMQAQLNIACLVVMLDNIARN--NRRIRKSGREEFLRKEEDNLLGIRSSESSRIKRVTR 125

Query: 208 ISG 216
            SG
Sbjct: 126 NSG 128


>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 762

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +1

Query: 64  RVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLK 171
           R  L N+A+T+L +K+ +   +  T++ VDAVL ++
Sbjct: 247 RDTLINVAKTSLRTKVRTELADLLTEVVVDAVLTIR 282


>SB_8887| Best HMM Match : G-patch (HMM E-Value=1.2e-08)
          Length = 739

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
 Frame = +1

Query: 97  LSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFL-DE--GFLLNKK 267
           L SKI+S+ + HF +    +    +G+ +LK+      S  + +  F+ DE  G   +  
Sbjct: 190 LQSKIVSSKELHFFEPTQISTSHEQGNQDLKSALAEAASAAMTKSGFVFDERTGLYYDWN 249

Query: 268 VGV-HQPKK--VENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVN 438
            G+ + P+     N N     T  ++ +   F S + + ++A  A+  V ++++ K+K  
Sbjct: 250 SGLYYNPRTCLYYNNNTGTYYTYNESSRSYDFHSQVDIQAIANTAQESVEKQKRRKEKKI 309

Query: 439 KILA 450
           K LA
Sbjct: 310 KGLA 313


>SB_13397| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 513

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 325 PMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAH 453
           P+ T  I+VF   I  D + KIA+ E+ E  K  + +     H
Sbjct: 399 PILTKLIRVFRRQILEDDLDKIAKTEIHEDSKFMEAIELFTHH 441


>SB_20714| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 494

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
 Frame = +1

Query: 256 LNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTI-KVDSMAKIAELEVAEKEKMKDK 432
           +N  +G     K ENA +   N  +    +    + I ++++        +AE  K +D 
Sbjct: 28  INANLGESVTLKAENAALKAENANLKASMLVDVSAKIGELENQLSELTHRLAEVVKERDG 87

Query: 433 VNKILAHKCNVFINRQLIY 489
           + K L  + N F NR+ ++
Sbjct: 88  LRKELGKEKNTFFNRESLF 106


>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
          Length = 856

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +1

Query: 334 TDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHK 456
           T+K   F   +++    ++AE+EV   E+  D+ ++   HK
Sbjct: 300 TEKTLTFAKALEIAQSMEMAEIEVVGIERALDRPDRAAKHK 340


>SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1184

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = +1

Query: 58  SLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISG 216
           +L++ L N+ R  L S I   ++   T  + D +LR K S  L A + IKISG
Sbjct: 332 NLQIALGNLIRD-LKSLINQLYQFRIT-CSYDEILRFKNSAALAATRDIKISG 382


>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6500

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +1

Query: 301  ANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 420
            A+I+ A TP++ DK+KV    + + + A ++EL     EK
Sbjct: 1812 ADIIKAATPLEQDKVKVV--AVAIGNEADVSELGNVSPEK 1849


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.315    0.131    0.350 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,496,797
Number of Sequences: 59808
Number of extensions: 278049
Number of successful extensions: 681
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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