Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313E03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 241 2e-64
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 241 2e-64
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 241 2e-64
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 66 2e-11
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 66 2e-11
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 64 8e-11
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 64 8e-11
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 59 2e-09
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 59 2e-09
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 52 3e-07
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 45 4e-05
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 45 4e-05
Z73972-3|CAA98259.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.094
U29488-1|AAA68773.2| 338|Caenorhabditis elegans Serpentine rece... 29 2.0
Z78198-4|CAB01570.1| 316|Caenorhabditis elegans Hypothetical pr... 28 3.5
D87850-1|BAA13470.1| 316|Caenorhabditis elegans elongation fact... 28 3.5
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 241 bits (590), Expect = 2e-64
Identities = 122/174 (70%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Frame = +1
Query: 4 KQALAEASFDHQKNLNEA--SLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGS 177
++AL A +K+ E+ ++R DL IARTTL SKILS HKEHF +LAVDAVLRLKGS
Sbjct: 128 RRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLKGS 187
Query: 178 GNLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFG 357
GNL AIQIIK GG + ES+LDEGFLL K G+ QP++VE A ILIANTPMDTDK+KVFG
Sbjct: 188 GNLDAIQIIKKLGGSMNESYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKVKVFG 247
Query: 358 STIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADA 519
S ++VD +AK+AELE AEK KMK+KV+KILAH CNVFINRQLIYNYPEQLFADA
Sbjct: 248 SRVRVDGVAKVAELEAAEKLKMKEKVDKILAHNCNVFINRQLIYNYPEQLFADA 301
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 241 bits (590), Expect = 2e-64
Identities = 122/174 (70%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Frame = +1
Query: 4 KQALAEASFDHQKNLNEA--SLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGS 177
++AL A +K+ E+ ++R DL IARTTL SKILS HKEHF +LAVDAVLRLKGS
Sbjct: 128 RRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLKGS 187
Query: 178 GNLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFG 357
GNL AIQIIK GG + ES+LDEGFLL K G+ QP++VE A ILIANTPMDTDK+KVFG
Sbjct: 188 GNLDAIQIIKKLGGSMNESYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKVKVFG 247
Query: 358 STIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADA 519
S ++VD +AK+AELE AEK KMK+KV+KILAH CNVFINRQLIYNYPEQLFADA
Sbjct: 248 SRVRVDGVAKVAELEAAEKLKMKEKVDKILAHNCNVFINRQLIYNYPEQLFADA 301
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 241 bits (590), Expect = 2e-64
Identities = 122/174 (70%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Frame = +1
Query: 4 KQALAEASFDHQKNLNEA--SLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGS 177
++AL A +K+ E+ ++R DL IARTTL SKILS HKEHF +LAVDAVLRLKGS
Sbjct: 128 RRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLKGS 187
Query: 178 GNLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFG 357
GNL AIQIIK GG + ES+LDEGFLL K G+ QP++VE A ILIANTPMDTDK+KVFG
Sbjct: 188 GNLDAIQIIKKLGGSMNESYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKVKVFG 247
Query: 358 STIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADA 519
S ++VD +AK+AELE AEK KMK+KV+KILAH CNVFINRQLIYNYPEQLFADA
Sbjct: 248 SRVRVDGVAKVAELEAAEKLKMKEKVDKILAHNCNVFINRQLIYNYPEQLFADA 301
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 65.7 bits (153), Expect = 2e-11
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Frame = +1
Query: 52 EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEE 231
E LR L A TTLSSK++S + F + VDAV L L I I K++GG L E
Sbjct: 146 ETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTLDAHLPLNMIGIKKVNGGNLHE 205
Query: 232 SFLDEGFLLNKKVGV----HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAEL 399
S L +G K QPKK N + + N ++ K + + +++ +++ +
Sbjct: 206 SRLIKGVAFQKAFSYAGFEMQPKKYSNVKVALLNIELEL-KAEKENAEMRLTNVSDFQAV 264
Query: 400 EVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFAD 516
AE + DK+ KI NV +++ I + Q FAD
Sbjct: 265 VDAEWNILYDKLQKIHDSGANVVLSKLPIGDVATQWFAD 303
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 65.7 bits (153), Expect = 2e-11
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Frame = +1
Query: 52 EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEE 231
E LR L A TTLSSK++S + F + VDAV L L I I K++GG L E
Sbjct: 146 ETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTLDAHLPLNMIGIKKVNGGNLHE 205
Query: 232 SFLDEGFLLNKKVGV----HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAEL 399
S L +G K QPKK N + + N ++ K + + +++ +++ +
Sbjct: 206 SRLIKGVAFQKAFSYAGFEMQPKKYSNVKVALLNIELEL-KAEKENAEMRLTNVSDFQAV 264
Query: 400 EVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFAD 516
AE + DK+ KI NV +++ I + Q FAD
Sbjct: 265 VDAEWNILYDKLQKIHDSGANVVLSKLPIGDVATQWFAD 303
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 63.7 bits (148), Expect = 8e-11
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
Frame = +1
Query: 7 QALAEASFDHQKNLNEASLRVDLEN------IARTTLSSKILSNHKEHFTKLAVDAVLRL 168
++ A+ + +K L+E S VDL N +A T+L+SK++S H +AV+AV ++
Sbjct: 134 ESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI 193
Query: 169 KGSG-----NLKAIQIIKISGGLLEESFLDEGFLLNKK-VGVHQPKKVENANILIANTPM 330
S NLK I+IIK G +EES L EG L+++K +G P ++E A I + +
Sbjct: 194 INSENDSNVNLKMIKIIKKMGDTVEESELIEGALIDQKTMGRGAPTRIEKAKIGLIQFQI 253
Query: 331 DTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLI 486
K + I D A++ E++ + + +I A CNV + ++ I
Sbjct: 254 SPPKTDMENQVIITD-YAQMDRALKEERQYLLEICKQIKAAGCNVLLIQKSI 304
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 63.7 bits (148), Expect = 8e-11
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
Frame = +1
Query: 7 QALAEASFDHQKNLNEASLRVDLEN------IARTTLSSKILSNHKEHFTKLAVDAVLRL 168
++ A+ + +K L+E S VDL N +A T+L+SK++S H +AV+AV ++
Sbjct: 134 ESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI 193
Query: 169 KGSG-----NLKAIQIIKISGGLLEESFLDEGFLLNKK-VGVHQPKKVENANILIANTPM 330
S NLK I+IIK G +EES L EG L+++K +G P ++E A I + +
Sbjct: 194 INSENDSNVNLKMIKIIKKMGDTVEESELIEGALIDQKTMGRGAPTRIEKAKIGLIQFQI 253
Query: 331 DTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLI 486
K + I D A++ E++ + + +I A CNV + ++ I
Sbjct: 254 SPPKTDMENQVIITD-YAQMDRALKEERQYLLEICKQIKAAGCNVLLIQKSI 304
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 58.8 bits (136), Expect = 2e-09
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Frame = +1
Query: 64 RVDLENIARTTLSSKILSNHKEHFTKLAVDA--VLRLKGSGN----LKAIQIIKISGGLL 225
R + N A+T++SSKI+ + F +L VDA +R++ +G + A+ ++K G
Sbjct: 149 RQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKAHGKSA 208
Query: 226 EESFLDEGFLLNKKVGVH-QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELE 402
ES L +G+ LN V P +V+NA I + + K+ + G ++ V+ AK+ +
Sbjct: 209 RESVLVKGYALNCTVASQAMPLRVQNAKIACLDFSLMKAKMHL-GISVVVEDPAKLEAIR 267
Query: 403 VAEKEKMKDKVNKILAHKCNVFI 471
E + K +++KIL NV +
Sbjct: 268 REEFDITKRRIDKILKAGANVVL 290
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 58.8 bits (136), Expect = 2e-09
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Frame = +1
Query: 64 RVDLENIARTTLSSKILSNHKEHFTKLAVDA--VLRLKGSGN----LKAIQIIKISGGLL 225
R + N A+T++SSKI+ + F +L VDA +R++ +G + A+ ++K G
Sbjct: 149 RQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKAHGKSA 208
Query: 226 EESFLDEGFLLNKKVGVH-QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELE 402
ES L +G+ LN V P +V+NA I + + K+ + G ++ V+ AK+ +
Sbjct: 209 RESVLVKGYALNCTVASQAMPLRVQNAKIACLDFSLMKAKMHL-GISVVVEDPAKLEAIR 267
Query: 403 VAEKEKMKDKVNKILAHKCNVFI 471
E + K +++KIL NV +
Sbjct: 268 REEFDITKRRIDKILKAGANVVL 290
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 51.6 bits (118), Expect = 3e-07
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Frame = +1
Query: 64 RVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISGGLLEE 231
R L A+T+L SKI++ F ++AVDAVL + N + I++ GG LE+
Sbjct: 161 RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRLED 220
Query: 232 SFLDEGFLLNKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVA 408
+ L +G +++K + Q PK+++NA + I P + K K + + S L
Sbjct: 221 TILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKT-KHKLDITSTEDFKALRDY 279
Query: 409 EKEKMKDKVNKI 444
E+E + + ++
Sbjct: 280 ERETFETMIRQV 291
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 51.6 bits (118), Expect = 3e-07
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Frame = +1
Query: 64 RVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISGGLLEE 231
R L A+T+L SKI++ F ++AVDAVL + N + I++ GG LE+
Sbjct: 161 RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRLED 220
Query: 232 SFLDEGFLLNKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVA 408
+ L +G +++K + Q PK+++NA + I P + K K + + S L
Sbjct: 221 TILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKT-KHKLDITSTEDFKALRDY 279
Query: 409 EKEKMKDKVNKI 444
E+E + + ++
Sbjct: 280 ERETFETMIRQV 291
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 51.6 bits (118), Expect = 3e-07
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Frame = +1
Query: 64 RVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISGGLLEE 231
R L A+T+L SKI++ F ++AVDAVL + N + I++ GG LE+
Sbjct: 161 RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRLED 220
Query: 232 SFLDEGFLLNKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVA 408
+ L +G +++K + Q PK+++NA + I P + K K + + S L
Sbjct: 221 TILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKT-KHKLDITSTEDFKALRDY 279
Query: 409 EKEKMKDKVNKI 444
E+E + + ++
Sbjct: 280 ERETFETMIRQV 291
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 44.8 bits (101), Expect = 4e-05
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Frame = +1
Query: 37 QKNLNEASLRVDL-ENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG---NLKAIQII 204
+K EA + DL + RT L +K+ +H T+ VDAVL ++ G +L ++ +
Sbjct: 135 EKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHMVEKM 194
Query: 205 KISGGLLEESFLDEGFLLNKKV-GVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSM 381
++ ++ L G +L+ P+ V++A IL N ++ +K +V S + +
Sbjct: 195 EMHHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEV-NSGLFYKTA 253
Query: 382 AKIAELEVAEKEKMKDKVNKILAHKCNVFIN 474
+ L AE+E + +V+KI+ K V N
Sbjct: 254 KEREALLAAEREFITRRVHKIIELKKKVIDN 284
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 44.8 bits (101), Expect = 4e-05
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Frame = +1
Query: 37 QKNLNEASLRVDL-ENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG---NLKAIQII 204
+K EA + DL + RT L +K+ +H T+ VDAVL ++ G +L ++ +
Sbjct: 135 EKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHMVEKM 194
Query: 205 KISGGLLEESFLDEGFLLNKKV-GVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSM 381
++ ++ L G +L+ P+ V++A IL N ++ +K +V S + +
Sbjct: 195 EMHHDSDMDTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEV-NSGLFYKTA 253
Query: 382 AKIAELEVAEKEKMKDKVNKILAHKCNVFIN 474
+ L AE+E + +V+KI+ K V N
Sbjct: 254 KEREALLAAEREFITRRVHKIIELKKKVIDN 284
>Z73972-3|CAA98259.1| 305|Caenorhabditis elegans Hypothetical
protein F15H10.6 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.094
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 5/144 (3%)
Frame = +1
Query: 19 EASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQ 198
E +DH + L E +LR L+ + R S+I+ NH + + + R N K +
Sbjct: 163 EVKYDHLEELLEQTLRTSLQLLIRNEELSEIILNH-----PIILSKIKRRIPIDNSKLLS 217
Query: 199 IIKISGGLLEESFLDEGFLLNKKVGVHQPKKVE-NANILIANTPMD----TDKIKVFGST 363
II + + D + K+ + + KKV+ + + ++ TD +++
Sbjct: 218 IITVKEVFCHPFYRDSKVAIFLKLKIPKVKKVKIEKQHITKKSDVEYSGFTDPYQLYHVV 277
Query: 364 IKVDSMAKIAELEVAEKEKMKDKV 435
+ + + I E+ +K KD V
Sbjct: 278 PQSNEIISIGNYELQQKTDYKDTV 301
>U29488-1|AAA68773.2| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 31 protein.
Length = 338
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1
Query: 347 LILSVSIGVFAIRMLAFSTFFG*CTPTFLFS 255
+I SV + VFAIR L + F CT T LFS
Sbjct: 32 IISSVFLTVFAIRKLWKNNIFPNCTRTLLFS 62
>Z78198-4|CAB01570.1| 316|Caenorhabditis elegans Hypothetical
protein F55C5.5 protein.
Length = 316
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 226 EESFLDEGFLLNKKVGVHQPKKVENANIL 312
E + L + F+LN VH+ K NANIL
Sbjct: 278 ETALLRQAFMLNPSQSVHEYLKSHNANIL 306
>D87850-1|BAA13470.1| 316|Caenorhabditis elegans elongation factor
Ts homologue protein.
Length = 316
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 226 EESFLDEGFLLNKKVGVHQPKKVENANIL 312
E + L + F+LN VH+ K NANIL
Sbjct: 278 ETALLRQAFMLNPSQSVHEYLKSHNANIL 306
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 385 KIAELEVAEKEKMKDKVNKILAHKCN 462
K+A + VA+ EK+ D + +I HK N
Sbjct: 363 KVASMFVADPEKLTDLLKQIFGHKNN 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.131 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,112,642
Number of Sequences: 27780
Number of extensions: 223408
Number of successful extensions: 598
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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