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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313E03f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P...   230   4e-61
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P...    73   2e-13
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP...    62   3e-10
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu...    56   1e-08
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu...    56   1e-08
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P...    55   3e-08
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P...    39   0.002
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P...    39   0.002
At5g48300.1 68418.m05966 glucose-1-phosphate adenylyltransferase...    29   1.9  
At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ...    29   1.9  
At3g27290.1 68416.m03411 F-box family protein-related contains w...    28   4.4  
At1g80960.3 68414.m09501 F-box protein-related contains weak hit...    27   5.8  
At1g80960.2 68414.m09500 F-box protein-related contains weak hit...    27   5.8  
At1g80960.1 68414.m09499 F-box protein-related contains weak hit...    27   5.8  
At1g64960.1 68414.m07363 expressed protein                             27   5.8  
At2g37080.1 68415.m04550 myosin heavy chain-related low similari...    27   7.7  

>At5g20890.1 68418.m02481 chaperonin, putative similar to
           SWISS-PROT:P78371- T-complex protein 1, beta subunit
           (TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
           domain, TCP-1/cpn60 chaperonin family
          Length = 527

 Score =  230 bits (563), Expect = 4e-61
 Identities = 110/173 (63%), Positives = 139/173 (80%)
 Frame = +1

Query: 1   AKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG 180
           A+ AL +   D++ N  +   R DL  IA TTL SKILS  KEHF ++AVDAV RLKGS 
Sbjct: 132 ARNALLKRVIDNKDNAEK--FRSDLLKIAMTTLCSKILSQDKEHFAEMAVDAVFRLKGST 189

Query: 181 NLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGS 360
           NL+AIQIIK  GG L++SFLDEGF+L+KK+G+ QPK++ENANIL+ANT MDTDK+K++G+
Sbjct: 190 NLEAIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGA 249

Query: 361 TIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADA 519
            ++VDSM K+AE+E AEKEKMKDKV KI+ H  N F+NRQLIYN+PE+LFADA
Sbjct: 250 RVRVDSMTKVAEIEGAEKEKMKDKVKKIIGHGINCFVNRQLIYNFPEELFADA 302


>At3g11830.1 68416.m01450 chaperonin, putative similar to
           SWISS-PROT:P80313 T-complex protein 1, eta subunit
           (TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
           domain, TCP-1/cpn60 chaperonin family
          Length = 557

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
 Frame = +1

Query: 73  LENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLDEGF 252
           L   A TTLSSK++   KE F  + VDAV+ +     L  I I K+ GG + +SFL +G 
Sbjct: 158 LAKCAATTLSSKLIGGEKEFFATMVVDAVMAIGNDDRLNLIGIKKVPGGNMRDSFLVDGV 217

Query: 253 LLNKKVGV----HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 420
              K         QPKK  N  IL+ N  ++  K +   + I++   ++   +  AE   
Sbjct: 218 AFKKTFSYAGFEQQPKKFLNPKILLLNIELEL-KSEKENAEIRLSDPSQYQSIVDAEWNI 276

Query: 421 MKDKVNKILAHKCNVFINRQLIYNYPEQLFAD 516
           + DK++K +     V ++R  I +   Q FAD
Sbjct: 277 IYDKLDKCVESGAKVVLSRLAIGDLATQYFAD 308


>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
           TCP-1-alpha / chaperonin (CCT1) identical to
           SWISS-PROT:P28769- T-complex protein 1, alpha subunit
           (TCP-1-alpha) [Arabidopsis thaliana]
          Length = 545

 Score = 61.7 bits (143), Expect = 3e-10
 Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
 Frame = +1

Query: 64  RVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN-------LKAIQIIKISGGL 222
           +V L N A+T++SSK++S   + F  L V+AVL +K +         +K I I+K  G  
Sbjct: 148 KVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSVKMTNQRGEIKYPIKGINILKAHGQS 207

Query: 223 LEESFLDEGFLLNK-KVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAEL 399
             +S+L  G+ LN  +     P +V  A I   +  +   K+++ G  + V+   ++ ++
Sbjct: 208 ARDSYLLNGYALNTGRAAQGMPLRVSPAKIACLDFNLQKTKMQL-GVQVVVNDPRELEKI 266

Query: 400 EVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADA 519
              E +  K+++ K+L    NV +  + I +   + F +A
Sbjct: 267 RQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEA 306


>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
           putative / TCP-1-epsilon, putative / chaperonin,
           putative identical to SWISS-PROT:O04450- T-complex
           protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
           thaliana]; strong similarity to SP|P54411 T-complex
           protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
           (TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
           TCP-1/cpn60 chaperonin family
          Length = 459

 Score = 56.0 bits (129), Expect = 1e-08
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
 Frame = +1

Query: 91  TTLSSKILSNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISGGLLEESFLDEGFLL 258
           TTLSSKI++  K    ++AV AVL +    +   NL  I++    GG LE++ L  G L+
Sbjct: 91  TTLSSKIVNRCKRSLAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILI 150

Query: 259 NKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKV 435
           +K +   Q PK++E+A+I I   P +  K K     + +D++ K   L   E++   + V
Sbjct: 151 DKDMSHPQMPKQIEDAHIAILTCPFEPPKPKT-KHKVDIDTVEKFETLRKQEQQYFDEMV 209

Query: 436 NK 441
            K
Sbjct: 210 QK 211


>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
           putative / TCP-1-epsilon, putative / chaperonin,
           putative identical to SWISS-PROT:O04450- T-complex
           protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
           thaliana]; strong similarity to SP|P54411 T-complex
           protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
           (TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
           TCP-1/cpn60 chaperonin family
          Length = 535

 Score = 56.0 bits (129), Expect = 1e-08
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
 Frame = +1

Query: 91  TTLSSKILSNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISGGLLEESFLDEGFLL 258
           TTLSSKI++  K    ++AV AVL +    +   NL  I++    GG LE++ L  G L+
Sbjct: 167 TTLSSKIVNRCKRSLAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILI 226

Query: 259 NKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKV 435
           +K +   Q PK++E+A+I I   P +  K K     + +D++ K   L   E++   + V
Sbjct: 227 DKDMSHPQMPKQIEDAHIAILTCPFEPPKPKT-KHKVDIDTVEKFETLRKQEQQYFDEMV 285

Query: 436 NK 441
            K
Sbjct: 286 QK 287


>At3g18190.1 68416.m02314 chaperonin, putative similar to
           SWISS-PROT:P50991- T-complex protein 1, delta subunit
           (TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
           domain, TCP-1/cpn60 chaperonin family
          Length = 536

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
 Frame = +1

Query: 52  EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG-----NLKAIQIIKISG 216
           E + R  L   A T+L+SK++S +      LAVDAVL +         +L+ I+I+K  G
Sbjct: 152 ELTDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDAVLSVIDPEKPEIVDLRDIKIVKKLG 211

Query: 217 GLLEESFLDEGFLLNKKV--GVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKI 390
           G ++++   +G + +KKV      P +VENA I +    +   K  +   +I V    ++
Sbjct: 212 GTVDDTHTVKGLVFDKKVSRAAGGPTRVENAKIAVIQFQISPPKTDI-EQSIVVSDYTQM 270

Query: 391 AELEVAEKEKMKDKVNKILAHKCNVFINRQLI 486
             +   E+  +   + KI A  CNV + ++ I
Sbjct: 271 DRILKEERNYILGMIKKIKATGCNVLLIQKSI 302


>At5g16070.1 68418.m01878 chaperonin, putative similar to
           SWISS-PROT:P80317 T-complex protein 1, zeta subunit
           (TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
           domain, TCP-1/cpn60 chaperonin family
          Length = 535

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 33/137 (24%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
 Frame = +1

Query: 73  LENIARTTLSSKILSNHKEHFTKLAVDAVLRLK---GSGNLKAIQIIKISGGLLEESFLD 243
           L+ +ARTTL +K+     +  T + V++VL ++    + +L  ++I+ +      ++ L 
Sbjct: 151 LKMVARTTLRTKLYEGLADQLTDIVVNSVLCIRKPEEAIDLFMVEIMHMRHKFDVDTRLV 210

Query: 244 EGFLLNKKVGVHQP---KKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEK 414
           EG +L+   G   P   ++ EN +IL  N  ++ +K ++       ++  + A +  AE+
Sbjct: 211 EGLVLDH--GSRHPDMKRRAENCHILTCNVSLEYEKSEINAGFFYSNAEQREA-MVTAER 267

Query: 415 EKMKDKVNKILAHKCNV 465
             + ++V KI+  K  V
Sbjct: 268 RSVDERVKKIIELKKKV 284


>At3g02530.1 68416.m00241 chaperonin, putative similar to
           SWISS-PROT:P80317- T-complex protein 1, zeta subunit
           (TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
           domain, TCP-1/cpn60 chaperonin family
          Length = 535

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 33/137 (24%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
 Frame = +1

Query: 73  LENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG---NLKAIQIIKISGGLLEESFLD 243
           L+ +ARTTL +K+     +  T + V++VL ++      +L  ++I+ +      ++ L 
Sbjct: 151 LKMVARTTLRTKLYEGLADQLTDIVVNSVLCIRKPQEPIDLFMVEIMHMRHKFDVDTRLV 210

Query: 244 EGFLLNKKVGVHQP---KKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEK 414
           EG +L+   G   P   ++ EN +IL  N  ++ +K ++       ++  + A +  AE+
Sbjct: 211 EGLVLDH--GSRHPDMKRRAENCHILTCNVSLEYEKSEINAGFFYSNAEQREA-MVTAER 267

Query: 415 EKMKDKVNKILAHKCNV 465
             + ++V KI+  K  V
Sbjct: 268 RSVDERVQKIIELKNKV 284


>At5g48300.1 68418.m05966 glucose-1-phosphate adenylyltransferase
           small subunit 1 (APS1) / ADP-glucose pyrophosphorylase
           (ADG1) identical to SP|P55228
          Length = 520

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 280 QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 420
           Q  +  +A+I +A  PMD  +   FG  +K+D   +I  +E AEK K
Sbjct: 226 QAHRETDADITVAALPMDEQRATAFG-LMKIDEEGRI--IEFAEKPK 269


>At1g19700.1 68414.m02457 homeobox-leucine zipper family protein
           similar to BEL1-like homeodomain 1 (GI:13877517)
           [Arabidopsis thaliana]; similar to homeodomain protein
           GI:7239157 from (Malus domestica); contains weak hit to
           Pfam profile PF00046: Homeobox domain
          Length = 538

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 19/73 (26%), Positives = 38/73 (52%)
 Frame = +1

Query: 229 ESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVA 408
           ++ LDE   + K++     KK++     + +    + +I+  G  +  DS  K  EL   
Sbjct: 176 QNLLDEVVSVKKELNQMGKKKMK-----VNDFNSGSKEIEGGGGELSSDSNGKSIELSTI 230

Query: 409 EKEKMKDKVNKIL 447
           E+E++++K NK+L
Sbjct: 231 EREELQNKKNKLL 243


>At3g27290.1 68416.m03411 F-box family protein-related contains weak
           similarity to PPA [Mus musculus] GP|18568225|gb|AAL75967
          Length = 382

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 130 HFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLDEGFL 255
           H TKL+V   LRL  +G +  ++ +K S  L  +S +  G L
Sbjct: 219 HLTKLSVSGCLRLSTAGLVSTLRDLKSSNRLGVKSLITGGAL 260


>At1g80960.3 68414.m09501 F-box protein-related contains weak hit to
           Pfam PF00646: F-box domain
          Length = 462

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +1

Query: 28  FDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKA 192
           FD +KN+  ++  +D  N    TL +++++NH+ H     +  V    G+G L +
Sbjct: 94  FDMRKNIINSNNTLDGSNPV-ATLITQVINNHRGHLESCVIIHVPYQGGNGMLNS 147


>At1g80960.2 68414.m09500 F-box protein-related contains weak hit to
           Pfam PF00646: F-box domain
          Length = 486

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +1

Query: 28  FDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKA 192
           FD +KN+  ++  +D  N    TL +++++NH+ H     +  V    G+G L +
Sbjct: 94  FDMRKNIINSNNTLDGSNPV-ATLITQVINNHRGHLESCVIIHVPYQGGNGMLNS 147


>At1g80960.1 68414.m09499 F-box protein-related contains weak hit to
           Pfam PF00646: F-box domain
          Length = 486

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +1

Query: 28  FDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKA 192
           FD +KN+  ++  +D  N    TL +++++NH+ H     +  V    G+G L +
Sbjct: 94  FDMRKNIINSNNTLDGSNPV-ATLITQVINNHRGHLESCVIIHVPYQGGNGMLNS 147


>At1g64960.1 68414.m07363 expressed protein
          Length = 1168

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
 Frame = -2

Query: 157 LHQLLIL*NALCDLKGSLSSVW---SVRCFLN 71
           +H+LL+  NA CDL G+ +S+    + RC +N
Sbjct: 694 VHKLLLSSNAFCDLIGTFTSIMQKTAYRCQIN 725


>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
           to myosin heavy chain [Rana catesbeiana] GI:4249701
          Length = 583

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
 Frame = +1

Query: 238 LDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTI---KVDSMAKIAELE-- 402
           +DE  +LN K+   +   +   N L  N P DT ++K   S +   + + M K  EL+  
Sbjct: 374 VDENEILNSKIKEKEEVYLNLENSLNQNEPEDTGELKKLESDVMELRANLMDKEMELQSV 433

Query: 403 VAEKEKMKDKVNKILAHK 456
           +++ E ++ ++  + + K
Sbjct: 434 MSQYESLRSEMETMQSEK 451


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.315    0.131    0.350 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,339,604
Number of Sequences: 28952
Number of extensions: 201942
Number of successful extensions: 565
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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