BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313E01f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical pr... 34 0.054 U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 34 0.054 Z82282-9|CAB05281.2| 361|Caenorhabditis elegans Hypothetical pr... 29 1.5 AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 29 1.5 AF000196-6|ABC71844.1| 137|Caenorhabditis elegans Hypothetical ... 29 1.5 AF000196-5|AAC24255.2| 140|Caenorhabditis elegans Hypothetical ... 29 1.5 AC006672-6|AAK84541.2| 341|Caenorhabditis elegans Hypothetical ... 29 2.0 EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is... 29 2.7 AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli... 29 2.7 AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes... 29 2.7 Z81051-8|CAB02869.1| 425|Caenorhabditis elegans Hypothetical pr... 28 3.5 L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore nu... 28 3.5 Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 28 4.7 Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 28 4.7 AL132876-8|CAD21660.1| 829|Caenorhabditis elegans Hypothetical ... 28 4.7 AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 28 4.7 AL033513-2|CAA22079.2| 439|Caenorhabditis elegans Hypothetical ... 27 6.2 AL021446-4|CAA16267.2| 439|Caenorhabditis elegans Hypothetical ... 27 6.2 Z81554-2|CAB04504.1| 259|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z49129-1|CAA88962.1| 262|Caenorhabditis elegans Hypothetical pr... 27 8.1 U80952-5|AAB38092.1| 424|Caenorhabditis elegans Hypothetical pr... 27 8.1 U50301-12|AAB37053.2| 486|Caenorhabditis elegans Hypothetical p... 27 8.1 U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 27 8.1 U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 27 8.1 AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical... 27 8.1 >U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical protein M03D4.4b protein. Length = 456 Score = 34.3 bits (75), Expect = 0.054 Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = +3 Query: 3 LINNSNDSQSNLLGSAAANKDLDLRVP-PVIPVS 101 ++NN+N+++SN+L + +KD +P P IP+S Sbjct: 242 ILNNNNNNESNILNGSVMHKDAGFEIPAPTIPLS 275 >U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical protein M03D4.4a protein. Length = 505 Score = 34.3 bits (75), Expect = 0.054 Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = +3 Query: 3 LINNSNDSQSNLLGSAAANKDLDLRVP-PVIPVS 101 ++NN+N+++SN+L + +KD +P P IP+S Sbjct: 291 ILNNNNNNESNILNGSVMHKDAGFEIPAPTIPLS 324 >Z82282-9|CAB05281.2| 361|Caenorhabditis elegans Hypothetical protein T07G12.12 protein. Length = 361 Score = 29.5 bits (63), Expect = 1.5 Identities = 19/72 (26%), Positives = 34/72 (47%) Frame = +3 Query: 102 SNNSIQTDLPGKDVDMRVQHSISILQTEDINDRVETSKELGISKDTIDIDQYTKDALKFA 281 SNNS++ + D+ H+ +I +DIN + +S + +D +D D D ++ Sbjct: 114 SNNSVEKVMDMIIEDVVSNHTTNIADGDDINSPIVSSGQSEFLQDGVDNDGNIDDYEEYQ 173 Query: 282 SKDKENIDISNE 317 S + I NE Sbjct: 174 SLPPNDDVIMNE 185 >AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical protein C35E7.9 protein. Length = 301 Score = 29.5 bits (63), Expect = 1.5 Identities = 28/113 (24%), Positives = 46/113 (40%) Frame = +3 Query: 21 DSQSNLLGSAAANKDLDLRVPPVIPVSSNNSIQTDLPGKDVDMRVQHSISILQTEDINDR 200 D +S+ +AA D ++ PPV V S S + + P K+ + + + + +++ Sbjct: 28 DGKSSTASAAAPKADSKMK-PPVENVKSKKSEKKEEPKKEEEPKKEEEKK--EKSKKSEK 84 Query: 201 VETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVSSESKD 359 + KE +D D KD K KD + D E E K E D Sbjct: 85 KDDKKEEAKKED--DKKDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDEKEKGD 135 >AF000196-6|ABC71844.1| 137|Caenorhabditis elegans Hypothetical protein B0041.6b protein. Length = 137 Score = 29.5 bits (63), Expect = 1.5 Identities = 21/75 (28%), Positives = 38/75 (50%) Frame = +3 Query: 189 INDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVSSESKDVDH 368 + D + KE+ + DT+D KD F + + +++ FE K+V S + V + Sbjct: 62 VYDLAKLKKEMSLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMS-NPSVLY 120 Query: 369 RVLPFVEETPRLILS 413 +V +EETP+ I + Sbjct: 121 KVT--IEETPKNIFT 133 >AF000196-5|AAC24255.2| 140|Caenorhabditis elegans Hypothetical protein B0041.6a protein. Length = 140 Score = 29.5 bits (63), Expect = 1.5 Identities = 21/75 (28%), Positives = 38/75 (50%) Frame = +3 Query: 189 INDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVSSESKDVDH 368 + D + KE+ + DT+D KD F + + +++ FE K+V S + V + Sbjct: 65 VYDLAKLKKEMSLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMS-NPSVLY 123 Query: 369 RVLPFVEETPRLILS 413 +V +EETP+ I + Sbjct: 124 KVT--IEETPKNIFT 136 >AC006672-6|AAK84541.2| 341|Caenorhabditis elegans Hypothetical protein K08D12.2 protein. Length = 341 Score = 29.1 bits (62), Expect = 2.0 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +3 Query: 348 ESKDVDHRVLPFVEETPRLILSNTDGASLKRECDTD 455 E+ VD +++PF + R+IL G ECD + Sbjct: 281 ETSTVDSKLVPFAGQAERMILFQLKGNLANLECDVE 316 >EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long isoform protein. Length = 1187 Score = 28.7 bits (61), Expect = 2.7 Identities = 23/87 (26%), Positives = 40/87 (45%) Frame = +3 Query: 171 ILQTEDINDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVSSE 350 +++T ++R T K + S I +Y + F K ++ NE NK E Sbjct: 616 VVETAHCSERKATVKWVAASDHGDSIKKYIVEM--FTDFKKNEWEVINEEVNVNK----E 669 Query: 351 SKDVDHRVLPFVEETPRLILSNTDGAS 431 + +VD + P+V T R++ N+ G S Sbjct: 670 TFEVDITLTPWVNYTFRVVAVNSHGRS 696 >AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin domain-containingprotein Y54G2A.25 protein. Length = 1187 Score = 28.7 bits (61), Expect = 2.7 Identities = 23/87 (26%), Positives = 40/87 (45%) Frame = +3 Query: 171 ILQTEDINDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVSSE 350 +++T ++R T K + S I +Y + F K ++ NE NK E Sbjct: 616 VVETAHCSERKATVKWVAASDHGDSIKKYIVEM--FTDFKKNEWEVINEEVNVNK----E 669 Query: 351 SKDVDHRVLPFVEETPRLILSNTDGAS 431 + +VD + P+V T R++ N+ G S Sbjct: 670 TFEVDITLTPWVNYTFRVVAVNSHGRS 696 >AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion molecule homologprotein 2, isoform a protein. Length = 1187 Score = 28.7 bits (61), Expect = 2.7 Identities = 23/87 (26%), Positives = 40/87 (45%) Frame = +3 Query: 171 ILQTEDINDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVSSE 350 +++T ++R T K + S I +Y + F K ++ NE NK E Sbjct: 616 VVETAHCSERKATVKWVAASDHGDSIKKYIVEM--FTDFKKNEWEVINEEVNVNK----E 669 Query: 351 SKDVDHRVLPFVEETPRLILSNTDGAS 431 + +VD + P+V T R++ N+ G S Sbjct: 670 TFEVDITLTPWVNYTFRVVAVNSHGRS 696 >Z81051-8|CAB02869.1| 425|Caenorhabditis elegans Hypothetical protein C55A6.9 protein. Length = 425 Score = 28.3 bits (60), Expect = 3.5 Identities = 15/70 (21%), Positives = 38/70 (54%) Frame = +3 Query: 186 DINDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVSSESKDVD 365 D V ++G++ D ID+ +Y +D ++ +K+NI + ++ K ++ S+ Sbjct: 60 DYKHAVICDDDMGLNVDLIDLKKYDEDPIETEIDEKDNILLEDDGAA--KLIAKRSQQ-H 116 Query: 366 HRVLPFVEET 395 +++P++ +T Sbjct: 117 SKLVPWMRKT 126 >L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore null protein 1 protein. Length = 1010 Score = 28.3 bits (60), Expect = 3.5 Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 6/119 (5%) Frame = +3 Query: 141 VDMRVQHSISILQTEDINDRVETSK--ELGISKDTIDIDQYTKDALKFASKDKENIDISN 314 VDM + ++L E ND+ ETS+ ++ I K ++ ++ K SK +++ + Sbjct: 321 VDMDITDQ-AVLNAEKKNDQFETSQLMDISIPKVLVNDTMAMFNSPKHVSKSSMDLEKTI 379 Query: 315 EPFENN---KAVSSESKDVDHRVLPFVEETP-RLILSNTDGASLKRECDTDIRFLHPEP 479 E + + +++ E +D+D + E+ P DG L++E DI + P Sbjct: 380 EAADKSTKYPSIADEVEDLD-MDMDITEQQPCEAGNQQNDGLQLQKEDLMDISVIRDSP 437 >Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein K08F8.6 protein. Length = 2862 Score = 27.9 bits (59), Expect = 4.7 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = +3 Query: 165 ISILQTEDINDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVS 344 + I++ D D E K+LG+ + + T F S+D +I+I N+P + +S Sbjct: 2686 LDIMEGLDDGD-TEIMKDLGLETPSSAAIRQTGGPSMFFSEDSSSIEIQNQPLASGYYIS 2744 Query: 345 S 347 + Sbjct: 2745 T 2745 >Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical protein K08F8.6 protein. Length = 2862 Score = 27.9 bits (59), Expect = 4.7 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = +3 Query: 165 ISILQTEDINDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVS 344 + I++ D D E K+LG+ + + T F S+D +I+I N+P + +S Sbjct: 2686 LDIMEGLDDGD-TEIMKDLGLETPSSAAIRQTGGPSMFFSEDSSSIEIQNQPLASGYYIS 2744 Query: 345 S 347 + Sbjct: 2745 T 2745 >AL132876-8|CAD21660.1| 829|Caenorhabditis elegans Hypothetical protein Y105E8A.9 protein. Length = 829 Score = 27.9 bits (59), Expect = 4.7 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 9 NNSNDSQSNLLGSAAANKDLDLRVPPVIPVSSNNSIQTDLPG 134 N SND S+LLG + + PP P ++NS D+ G Sbjct: 651 NPSNDYSSDLLGVGVGSGAASAQAPPPPPPPTSNSNILDIFG 692 >AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex subunit Med13 protein. Length = 2862 Score = 27.9 bits (59), Expect = 4.7 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = +3 Query: 165 ISILQTEDINDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVS 344 + I++ D D E K+LG+ + + T F S+D +I+I N+P + +S Sbjct: 2686 LDIMEGLDDGD-TEIMKDLGLETPSSAAIRQTGGPSMFFSEDSSSIEIQNQPLASGYYIS 2744 Query: 345 S 347 + Sbjct: 2745 T 2745 >AL033513-2|CAA22079.2| 439|Caenorhabditis elegans Hypothetical protein Y70D2A.1 protein. Length = 439 Score = 27.5 bits (58), Expect = 6.2 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = -3 Query: 462 ILCLYHTLVLKTPRLYLTKLTLVSLPQTVTLCDLHPLIRWI 340 ++ L H L+ K+ +Y T LTL+++ +T + P+I W+ Sbjct: 59 VVTLTHPLLRKSSIIY-TYLTLLAMTDLLTQFSVIPMIMWL 98 >AL021446-4|CAA16267.2| 439|Caenorhabditis elegans Hypothetical protein Y70D2A.1 protein. Length = 439 Score = 27.5 bits (58), Expect = 6.2 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = -3 Query: 462 ILCLYHTLVLKTPRLYLTKLTLVSLPQTVTLCDLHPLIRWI 340 ++ L H L+ K+ +Y T LTL+++ +T + P+I W+ Sbjct: 59 VVTLTHPLLRKSSIIY-TYLTLLAMTDLLTQFSVIPMIMWL 98 >Z81554-2|CAB04504.1| 259|Caenorhabditis elegans Hypothetical protein F57G4.5 protein. Length = 259 Score = 27.1 bits (57), Expect = 8.1 Identities = 22/107 (20%), Positives = 43/107 (40%) Frame = +3 Query: 102 SNNSIQTDLPGKDVDMRVQHSISILQTEDINDRVETSKELGISKDTIDIDQYTKDALKFA 281 ++ S+Q + D + S S LQT + K+ + K+ + D ++ Sbjct: 96 NSRSMQDYMCRADSESISTSSSSALQTNKFPEDSSHRKDYSLPKNLYNQDDSLLHDFEYP 155 Query: 282 SKDKENIDISNEPFENNKAVSSESKDVDHRVLPFVEETPRLILSNTD 422 + K+ EN++ S + D + P + TP++ LS D Sbjct: 156 ERHKKVTSTRRIDSENSRQGSPIIFEEDIQECPLTKRTPKIHLSKGD 202 >Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical protein C04G2.6 protein. Length = 1029 Score = 27.1 bits (57), Expect = 8.1 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = +3 Query: 243 DIDQYTKDALKFASKDKENIDISNEP 320 D+++Y K A ++D+EN D ++EP Sbjct: 314 DVEEYVKTADDMGNEDEENDDENDEP 339 >Z49129-1|CAA88962.1| 262|Caenorhabditis elegans Hypothetical protein T05B9.1 protein. Length = 262 Score = 27.1 bits (57), Expect = 8.1 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Frame = +3 Query: 276 FASKDKENIDISNEPFENNK-AVSSESKDV--DHRVLPFVE---ETPRLILSNTDGASLK 437 F + +KE D+ ++NN A + DV + R P V+ E P L S Sbjct: 88 FEAHEKEIADLKARQYQNNSIAAQTPPPDVRQELRSFPMVKHSRENPELRNVPVLIFSRC 147 Query: 438 RECDTDIRFLHPEPLFKNPEKRH 506 C+TD +H P++ KR+ Sbjct: 148 MLCETDEHTIHSCPIYNTNSKRY 170 >U80952-5|AAB38092.1| 424|Caenorhabditis elegans Hypothetical protein F54H5.2 protein. Length = 424 Score = 27.1 bits (57), Expect = 8.1 Identities = 22/114 (19%), Positives = 47/114 (41%) Frame = +3 Query: 42 GSAAANKDLDLRVPPVIPVSSNNSIQTDLPGKDVDMRVQHSISILQTEDINDRVETSKEL 221 G + N D +P P S + + + K+ + ++ + + + ++T+++ Sbjct: 304 GKFSWNDPFDWEMPISTPPSKSITKSPNQLSKETIKKASREKTLSKEKTSKEDIKTAQKT 363 Query: 222 GISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVSSESKDVDHRVLPF 383 I KD + K + + ASK+K ++ K K+ R+LPF Sbjct: 364 SIEKDVKE-----KLSKEMASKEKISLSAEKINMSAEKIEEDNKKEEYMRMLPF 412 >U50301-12|AAB37053.2| 486|Caenorhabditis elegans Hypothetical protein F20D6.10 protein. Length = 486 Score = 27.1 bits (57), Expect = 8.1 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 11/81 (13%) Frame = +3 Query: 192 NDRVETSKELGISKDTIDIDQYT-----------KDALKFASKDKENIDISNEPFENNKA 338 N VE K + KDT+++ + +D +K S K N ++ + + Sbjct: 263 NTDVEAGKRESVKKDTVELARIESLETPPLSPIPEDEIKEPSPSKTNQKLNRSNSRSEER 322 Query: 339 VSSESKDVDHRVLPFVEETPR 401 S + V HRV + ETP+ Sbjct: 323 RGSTNSTVSHRVNRGLSETPK 343 >U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glutamine tract) toxicityenhancer protein 1, isoform a protein. Length = 1081 Score = 27.1 bits (57), Expect = 8.1 Identities = 23/93 (24%), Positives = 43/93 (46%) Frame = +3 Query: 90 IPVSSNNSIQTDLPGKDVDMRVQHSISILQTEDINDRVETSKELGISKDTIDIDQYTKDA 269 + ++ ++ ++D PG + +++ +T++ N VET E +D I I + K Sbjct: 746 VQIAQVSTSESDAPGTS-EAAATETMTSPKTKN-NVIVETEGEQEEDEDEIPIKKSKKRR 803 Query: 270 LKFASKDKENIDISNEPFENNKAVSSESKDVDH 368 K S D+E EP + K S E ++ H Sbjct: 804 AKIVSNDEE-----EEPVRHPKRRSDEKREKRH 831 >U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glutamine tract) toxicityenhancer protein 1, isoform b protein. Length = 1647 Score = 27.1 bits (57), Expect = 8.1 Identities = 23/93 (24%), Positives = 43/93 (46%) Frame = +3 Query: 90 IPVSSNNSIQTDLPGKDVDMRVQHSISILQTEDINDRVETSKELGISKDTIDIDQYTKDA 269 + ++ ++ ++D PG + +++ +T++ N VET E +D I I + K Sbjct: 746 VQIAQVSTSESDAPGTS-EAAATETMTSPKTKN-NVIVETEGEQEEDEDEIPIKKSKKRR 803 Query: 270 LKFASKDKENIDISNEPFENNKAVSSESKDVDH 368 K S D+E EP + K S E ++ H Sbjct: 804 AKIVSNDEE-----EEPVRHPKRRSDEKREKRH 831 >AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical protein F45C12.3 protein. Length = 470 Score = 27.1 bits (57), Expect = 8.1 Identities = 30/114 (26%), Positives = 52/114 (45%) Frame = +3 Query: 174 LQTEDINDRVETSKELGISKDTIDIDQYTKDALKFASKDKENIDISNEPFENNKAVSSES 353 L+T+D N++ E +KE+ + + +++ K L+ S+ KE +++ N V S+ Sbjct: 334 LETQDDNEKFEETKEIKTPMEPVKLEETEK--LEKPSELKEFNELAQ---LNELKVLSQP 388 Query: 354 KDVDHRVLPFVEETPRLILSNTDGASLKRECDTDIRFLHPEPLFKNPEKRHRRS 515 K + P E + N D S+K E D+ F NP K +R S Sbjct: 389 KRSEKPEKPNEYERSK----NLDDGSIKLEEHEDLEEDKELKEFVNPGKFNRPS 438 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,330,219 Number of Sequences: 27780 Number of extensions: 227795 Number of successful extensions: 618 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 594 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 618 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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