Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313D12f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    42   0.011
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-...    38   0.14 
UniRef50_A0FUY8 Cluster: Putative uncharacterized protein precur...    32   9.2  
UniRef50_A4RHR2 Cluster: Putative uncharacterized protein; n=3; ...    32   9.2  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 41.5 bits (93), Expect = 0.011
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = -2

Query: 388 PGDGAKQSRRRRKHVMSDLLDTLSVLLGSSGTGH 287
           P DGA +SRR   HV+SD  D+LSVLL  S TG+
Sbjct: 26  PRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGY 59



 Score = 33.1 bits (72), Expect = 4.0
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -1

Query: 185 CEALLLPGLVLANSLRL 135
           CEALLL GLVLANSLRL
Sbjct: 94  CEALLLLGLVLANSLRL 110


>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
           transcriptase-like protein; n=9; cellular organisms|Rep:
           Endonuclease and reverse transcriptase-like protein -
           Bombyx mori (Silk moth)
          Length = 960

 Score = 37.9 bits (84), Expect = 0.14
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = -3

Query: 507 DLNLVLIRKYLKEASELYFEKTARHDN 427
           DL L  IRK++K  SE YF+K  RHDN
Sbjct: 866 DLGLESIRKHMKSVSERYFDKAMRHDN 892


>UniRef50_A0FUY8 Cluster: Putative uncharacterized protein
           precursor; n=1; Burkholderia phymatum STM815|Rep:
           Putative uncharacterized protein precursor -
           Burkholderia phymatum STM815
          Length = 439

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -1

Query: 440 RGTITVITATANYICIRPRRRGKAKPPSPKTCHVRSLR 327
           R TI   TA     C  P  R  A PP P+ C VR+ R
Sbjct: 82  RCTIARATAITGRCCAAPVPRAAACPPKPRRCSVRTKR 119


>UniRef50_A4RHR2 Cluster: Putative uncharacterized protein; n=3;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 507

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -1

Query: 473 RKRQSSTLKKRRGTITVITATANYICIRPRRRGKAKPPSPKTCHVR-SLRYTLGTFRFFR 297
           +K ++   KK+RGT     ++     + P   GK  PP PK   ++ S+R  L + R FR
Sbjct: 117 KKSKNRNNKKQRGTDEAAESSPTTAALAPAAAGKPPPPPPKLTPLQASMRAKLISAR-FR 175

Query: 296 H 294
           H
Sbjct: 176 H 176


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,223,252
Number of Sequences: 1657284
Number of extensions: 7593465
Number of successful extensions: 17575
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17570
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)