Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313D03f
         (408 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   8.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    20   8.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    20   8.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    20   8.1  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 246 WLLWTRNKTSQNLHSCT 296
           WLLW  ++T   LH  T
Sbjct: 467 WLLWLLSQTWITLHIWT 483


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 246 WLLWTRNKTSQNLHSCT 296
           WLLW  ++T   LH  T
Sbjct: 467 WLLWLLSQTWITLHIWT 483


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 246 WLLWTRNKTSQNLHSCT 296
           WLLW  ++T   LH  T
Sbjct: 467 WLLWLLSQTWITLHIWT 483


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 246 WLLWTRNKTSQNLHSCT 296
           WLLW  ++T   LH  T
Sbjct: 467 WLLWLLSQTWITLHIWT 483


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 175 YTKGYGFVRF 204
           YTKGYG + F
Sbjct: 287 YTKGYGVMGF 296


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 106 LYRVFASKYTSIKTAKVILDNSGYTKGYGFVR 201
           L+++FA     I+  ++    SG   GY +++
Sbjct: 90  LHKIFAKGLNVIEANRLFFYCSGLASGYLYLK 121


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 106 LYRVFASKYTSIKTAKVILDNSGYTKGYGFVR 201
           L+++FA     I+  ++    SG   GY +++
Sbjct: 90  LHKIFAKGLNVIEANRLFFYCSGLASGYLYLK 121


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 106 LYRVFASKYTSIKTAKVILDNSGYTKGYGFVR 201
           L+++FA     I+  ++    SG   GY +++
Sbjct: 90  LHKIFAKGLNVIEANRLFFYCSGLASGYLYLK 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.135    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,634
Number of Sequences: 336
Number of extensions: 1871
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)