BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313D03f (408 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 23 1.8 AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 2.3 DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 7.1 DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 7.1 DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 7.1 DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 7.1 DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 7.1 >AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein kinase foraging protein. Length = 678 Score = 22.6 bits (46), Expect = 1.8 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Frame = +1 Query: 130 YTSIKTAKVILDNSGYTK--GYGFVR 201 Y +K ++LD+ GY K +GF + Sbjct: 489 YRDLKPENLLLDSQGYVKLVDFGFAK 514 >AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic acetylcholine Apisa7-2 subunit protein. Length = 461 Score = 22.2 bits (45), Expect = 2.3 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 Query: 202 FGNEDEQRNALYAMNGYCGLGTKP 273 FG+E E R Y ++GY G +P Sbjct: 1 FGDEHEYRLTKYLLDGY-DAGVRP 23 >DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 20.6 bits (41), Expect = 7.1 Identities = 6/12 (50%), Positives = 8/12 (66%) Frame = +3 Query: 312 SNNCSVYFYNFN 347 +NNC +YN N Sbjct: 101 NNNCKKLYYNIN 112 >DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex determiner protein. Length = 186 Score = 20.6 bits (41), Expect = 7.1 Identities = 6/12 (50%), Positives = 8/12 (66%) Frame = +3 Query: 312 SNNCSVYFYNFN 347 +NNC +YN N Sbjct: 106 NNNCKKLYYNIN 117 >DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 20.6 bits (41), Expect = 7.1 Identities = 6/12 (50%), Positives = 8/12 (66%) Frame = +3 Query: 312 SNNCSVYFYNFN 347 +NNC +YN N Sbjct: 106 NNNCKKLYYNIN 117 >DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 20.6 bits (41), Expect = 7.1 Identities = 6/12 (50%), Positives = 8/12 (66%) Frame = +3 Query: 312 SNNCSVYFYNFN 347 +NNC +YN N Sbjct: 106 NNNCKKLYYNIN 117 >DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 20.6 bits (41), Expect = 7.1 Identities = 6/12 (50%), Positives = 8/12 (66%) Frame = +3 Query: 312 SNNCSVYFYNFN 347 +NNC +YN N Sbjct: 106 NNNCKKLYYNIN 117 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.135 0.415 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 107,581 Number of Sequences: 438 Number of extensions: 2180 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 10256061 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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