Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313D02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   2.9  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = -2

Query: 517 HPSRSVHVACLKLWASFVSIAVFVPLTLLHSI-FFGLCLQ 401
           HPS       LK W   +   VFV   L H +    LC+Q
Sbjct: 576 HPSDKSAKPMLKPWQRVLPDGVFVAFLLKHIVPKLQLCMQ 615


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
 Frame = -1

Query: 308 NIVLSRLTHVNYGSYKVRCAICRTIRKETSNACY--SPLFRKSIIIRLQMSPATAFSMCN 135
           N+ L   T V+     V C  C    K+T + CY     F  +  +R ++         N
Sbjct: 280 NLCLVIYTLVSVSLVMVTCDACTIASKQTISWCYKLQEQFVTNSEVRTELFKLAQHVSAN 339

Query: 134 CYEICLRNY 108
              I   NY
Sbjct: 340 IVHITAGNY 348


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
 Frame = -1

Query: 308 NIVLSRLTHVNYGSYKVRCAICRTIRKETSNACY--SPLFRKSIIIRLQMSPATAFSMCN 135
           N+ L   T V+     V C  C    K+T + CY     F  +  +R ++         N
Sbjct: 280 NLCLVIYTLVSVSLVMVTCDACTIASKQTISWCYKLQEQFVTNSEVRTELFKLAQHVSAN 339

Query: 134 CYEICLRNY 108
              I   NY
Sbjct: 340 IVHITAGNY 348


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 263 KVRCAICRTIRKETSNAC 210
           K+  A+C++ RK+ S++C
Sbjct: 30  KLLDALCQSFRKQNSSSC 47


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +2

Query: 32  NNKYNVDCKQYYSTNKYLIFTKISSYNF*DISHNSYTLKRQLLETFV 172
           ++ +  D +Q+Y T    IFT I       I  ++ T++     TF+
Sbjct: 59  SSSFEADLRQFYKTAYSAIFTVIDFSLCKAILVHAITIRSTFSWTFI 105


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -1

Query: 77  YWCCSIVYNLHYIY 36
           ++C SI +N+H ++
Sbjct: 59  FYCVSITFNVHLLF 72


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = -2

Query: 517 HPSRSVHVACLKLWASFVSIAVFVPLTLLHSIFFGLCLQEDLTGDFKHVL 368
           HP+  +     ++  S+  I  F  ++   + FF L  ++D     KH+L
Sbjct: 45  HPTSKLVPPDERITYSWTEINAFANVSPSKTKFFNLIKRKDSPVQKKHIL 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,540
Number of Sequences: 336
Number of extensions: 2497
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)