BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313D02f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ150101-1|AAZ77787.1| 386|Caenorhabditis elegans synthetic mul... 31 0.38 AF025452-10|AAB70947.2| 386|Caenorhabditis elegans Hypothetical... 31 0.38 Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical pr... 27 8.1 AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and c... 27 8.1 >DQ150101-1|AAZ77787.1| 386|Caenorhabditis elegans synthetic multivulva protein LIN-8 protein. Length = 386 Score = 31.5 bits (68), Expect = 0.38 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 50 DCKQYYSTNKYLIFTKISSYNF*DISHNSYTLKRQLL 160 D +Y+ST KY+ +K + F D N TLK+ +L Sbjct: 33 DPTRYFSTEKYIALSKDEKFKFDDYDVNDETLKKVVL 69 >AF025452-10|AAB70947.2| 386|Caenorhabditis elegans Hypothetical protein B0454.1 protein. Length = 386 Score = 31.5 bits (68), Expect = 0.38 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 50 DCKQYYSTNKYLIFTKISSYNF*DISHNSYTLKRQLL 160 D +Y+ST KY+ +K + F D N TLK+ +L Sbjct: 33 DPTRYFSTEKYIALSKDEKFKFDDYDVNDETLKKVVL 69 >Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical protein T23G5.5 protein. Length = 615 Score = 27.1 bits (57), Expect = 8.1 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = -1 Query: 317 YFYNIVLSRLTHVNYGSYKVRCAICRTIRKETSNACYSP 201 +FYN++L+ H Y S+ S ACY P Sbjct: 135 FFYNVILAWGLHYLYTSFSFNLPWASCNNSYNSPACYEP 173 >Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical protein T23G5.5 protein. Length = 615 Score = 27.1 bits (57), Expect = 8.1 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = -1 Query: 317 YFYNIVLSRLTHVNYGSYKVRCAICRTIRKETSNACYSP 201 +FYN++L+ H Y S+ S ACY P Sbjct: 135 FFYNVILAWGLHYLYTSFSFNLPWASCNNSYNSPACYEP 173 >AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and chloride-dependentantidepressant- and cocaine-sensitive dopamine transporterprotein. Length = 615 Score = 27.1 bits (57), Expect = 8.1 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = -1 Query: 317 YFYNIVLSRLTHVNYGSYKVRCAICRTIRKETSNACYSP 201 +FYN++L+ H Y S+ S ACY P Sbjct: 135 FFYNVILAWGLHYLYTSFSFNLPWASCNNSYNSPACYEP 173 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,060,549 Number of Sequences: 27780 Number of extensions: 216212 Number of successful extensions: 588 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 575 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 588 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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