Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313C12f
         (391 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    26   0.11 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   0.81 
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   3.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   4.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   4.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    20   7.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      20   10.0 

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 26.2 bits (55), Expect = 0.11
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 199 SVFLLLRTESSFGSDIRWTILSHSTQTTFPAARILLFDGIYFTE 68
           ++FLL +   +F     WTIL       F   R+L++  I+ TE
Sbjct: 196 NLFLLSQAVETFNDIFGWTILQ---TVFFTVPRVLMYFDIFITE 236


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 0.81
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +2

Query: 152 DIRAKTGLCPKQQKDGIECCYGVSVKETRCRKHGGECFS-KGYCSQSLIYEEASDCPEGN 328
           D + K G  P+QQ+   E C     + +    +   C   KG+  +S+       C  GN
Sbjct: 172 DSKKKKGPTPRQQE---ELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGN 228

Query: 329 DC 334
           +C
Sbjct: 229 NC 230


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = +2

Query: 239 CRKHGGECFSKGY-CSQSLIYEEAS 310
           CRK+ G C   G  CSQ   + + S
Sbjct: 97  CRKNTGRCAFDGICCSQDSCHADKS 121


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 204 SIPSFCCLGQSPVLALISD 148
           SIP+F CL  S  L L+ +
Sbjct: 216 SIPAFTCLPLSDQLLLLEE 234


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 204 SIPSFCCLGQSPVLALISD 148
           SIP+F CL  S  L L+ +
Sbjct: 216 SIPAFTCLPLSDQLLLLEE 234


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 152 DIRAKTGLCPKQQKDGIE 205
           DIRA     P+QQ DG E
Sbjct: 90  DIRAAGYYGPQQQMDGQE 107


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 201 IPSFCCLGQ 175
           IPSF C+G+
Sbjct: 60  IPSFACIGR 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,097
Number of Sequences: 336
Number of extensions: 1922
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)