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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313C12f
         (391 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    32   0.12 
AC006633-3|AAK68375.1|  227|Caenorhabditis elegans Hypothetical ...    31   0.22 
Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical pr...    29   0.88 
Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical pr...    29   0.88 
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p...    29   0.88 
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p...    29   0.88 
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    29   0.88 
U41546-5|AAC48222.2| 1022|Caenorhabditis elegans Sodium:neurotra...    29   1.2  
AC024839-1|AAF60832.2|  232|Caenorhabditis elegans Thaumatin fam...    29   1.2  
Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...    28   2.0  
Z68159-2|CAD89732.1|  354|Caenorhabditis elegans Hypothetical pr...    28   2.7  
AF025472-3|AAB71075.2|  843|Caenorhabditis elegans Hypothetical ...    28   2.7  
Z30423-10|CAA83014.1|  216|Caenorhabditis elegans Hypothetical p...    27   3.6  
U88173-9|AAK21384.3|  320|Caenorhabditis elegans Hypothetical pr...    27   3.6  
U41991-7|AAA83347.1|  255|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z68159-3|CAD89733.1|  351|Caenorhabditis elegans Hypothetical pr...    27   4.7  
AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical ...    27   4.7  
AF025472-1|AAY43980.1|  832|Caenorhabditis elegans Hypothetical ...    27   4.7  
Z81547-3|CAB04461.1|  253|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AL110482-6|CAB60339.1|  179|Caenorhabditis elegans Hypothetical ...    27   6.2  

>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
            ZC84.1 protein.
          Length = 1556

 Score = 32.3 bits (70), Expect = 0.12
 Identities = 24/82 (29%), Positives = 33/82 (40%)
 Frame = +2

Query: 71   CEIDSIEQEDPCRREGGLCTVAQDCPSDIRAKTGLCPKQQKDGIECCYGVSVKETRCRKH 250
            CE    E   P +  GG C     C S+     GLC  + K G E C  V     +C+++
Sbjct: 1196 CEDAKCECRPPLKAVGGFCQEEIQCSSNQVLHNGLCHNKAKLG-EACLTV----RQCQEN 1250

Query: 251  GGECFSKGYCSQSLIYEEASDC 316
             G       C +  I E+A  C
Sbjct: 1251 SGCIEGSCECKKGFI-EKAGKC 1271


>AC006633-3|AAK68375.1|  227|Caenorhabditis elegans Hypothetical
           protein F35B3.4 protein.
          Length = 227

 Score = 31.5 bits (68), Expect = 0.22
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +2

Query: 143 CPSDIRAKTGLCPKQQKDGIECCYGVSVKETRCRKHGGECFSKGYCSQ 286
           CP    A    C  Q +D  +CCY  SV  T     G +CF+  +C Q
Sbjct: 113 CPMQAAADIQYCAAQGQDHTDCCYRNSVGTTLA---GNKCFT--FCDQ 155


>Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical
           protein T22H2.6b protein.
          Length = 345

 Score = 29.5 bits (63), Expect = 0.88
 Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
 Frame = +2

Query: 5   IMKFLLFFAMCILVYGNSEDDFCEIDSIEQEDPCR---REGGLCTVAQDCPSDIRAKTGL 175
           IM+ +L F    L    +     E +  + E  C+      G C +      D R+    
Sbjct: 78  IMRLILLFLAVFLCRVTAHQCDAETECSDDETCCKLGDNTWGCCPMPNAVCCDDRSHC-- 135

Query: 176 CPKQ---QKDGIECCYGVSVKET--RCRKHGGECFSKGYCSQSLIYEEASDCPEGNDCCI 340
           CP        G  C  G   K    + +K   +   +   ++ +  ++AS CP+G+ CC+
Sbjct: 136 CPTGTTCDPQGARCI-GADEKHVPMKKKKPARKTVERNQFNEVVCPDKASKCPDGSTCCL 194

Query: 341 L 343
           L
Sbjct: 195 L 195


>Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical
           protein T22H2.6a protein.
          Length = 358

 Score = 29.5 bits (63), Expect = 0.88
 Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
 Frame = +2

Query: 5   IMKFLLFFAMCILVYGNSEDDFCEIDSIEQEDPCR---REGGLCTVAQDCPSDIRAKTGL 175
           IM+ +L F    L    +     E +  + E  C+      G C +      D R+    
Sbjct: 78  IMRLILLFLAVFLCRVTAHQCDAETECSDDETCCKLGDNTWGCCPMPNAVCCDDRSHC-- 135

Query: 176 CPKQ---QKDGIECCYGVSVKET--RCRKHGGECFSKGYCSQSLIYEEASDCPEGNDCCI 340
           CP        G  C  G   K    + +K   +   +   ++ +  ++AS CP+G+ CC+
Sbjct: 136 CPTGTTCDPQGARCI-GADEKHVPMKKKKPARKTVERNQFNEVVCPDKASKCPDGSTCCL 194

Query: 341 L 343
           L
Sbjct: 195 L 195


>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
             K07E12.1a protein.
          Length = 13100

 Score = 29.5 bits (63), Expect = 0.88
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +2

Query: 140   DCPSDIRAKTGLCPKQ--QKDGIECCYGVSVKETRCRKHGGECFSKGYCSQSLIYEEASD 313
             +CP  ++A  G CPK    KDG   CY +      C  + G+C S+G  +    Y  A  
Sbjct: 12963 ECPCKVKAHGGRCPKGYIAKDG--QCYDID----ECETNNGQC-SEGCVNTPGSYYCA-- 13013

Query: 314   CPEG 325
             CP G
Sbjct: 13014 CPHG 13017


>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
          Length = 13100

 Score = 29.5 bits (63), Expect = 0.88
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +2

Query: 140   DCPSDIRAKTGLCPKQ--QKDGIECCYGVSVKETRCRKHGGECFSKGYCSQSLIYEEASD 313
             +CP  ++A  G CPK    KDG   CY +      C  + G+C S+G  +    Y  A  
Sbjct: 12963 ECPCKVKAHGGRCPKGYIAKDG--QCYDID----ECETNNGQC-SEGCVNTPGSYYCA-- 13013

Query: 314   CPEG 325
             CP G
Sbjct: 13014 CPHG 13017


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
           protein C08G9.2 protein.
          Length = 2224

 Score = 29.5 bits (63), Expect = 0.88
 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
 Frame = +2

Query: 71  CEIDSIEQEDPCRREGG---LCTVAQDCPSDIRAKTGLCPKQQKDGIECCYGVSVKETRC 241
           C ++      P R   G   LC++ +DCP       G C K   +G+  C       TR 
Sbjct: 380 CLLNPCRHGPPSRLGNGITALCSIDKDCPE------GTCSKIGYNGLGFCCSGPASSTRD 433

Query: 242 RKHGGECFSKGYCSQSLIYEEAS-----DCPEGNDCC 337
            +   +   K  C   LIY + S     +C E   CC
Sbjct: 434 GRCPSQAADKLKC---LIYPDNSCHSDHECSEDEKCC 467


>U41546-5|AAC48222.2| 1022|Caenorhabditis elegans
           Sodium:neurotransmitter symporterfamily protein 12
           protein.
          Length = 1022

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
 Frame = -1

Query: 277 VAFRETFSAVLPTSGLFYGHSVTAFDSVFLLLRTESSFGSDIRWTILSHSTQTTF--PAA 104
           V  RE   +    + LFY   V   D    LL   SS G + +W  +   T ++   P +
Sbjct: 43  VKLRELVGSSANDAALFYLECVCHADETERLLNRGSSVGKEKKWKKVKRKTSSSVAPPLS 102

Query: 103 R-ILLFDGIYFTEIIFTVSVN 44
           R I    G+   ++I T+ V+
Sbjct: 103 RTISSLPGVSSPDVIQTIDVS 123


>AC024839-1|AAF60832.2|  232|Caenorhabditis elegans Thaumatin family
           protein 5 protein.
          Length = 232

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
 Frame = +2

Query: 77  IDSIEQEDPCRREGGLCTVAQD-CPSDIRAKTGLCPKQQKDGI-------ECCYGVSVKE 232
           ID    E  CRR GG      D CP D+  +        K G        ECC G     
Sbjct: 130 IDPYGGEGDCRRAGGCFKNINDFCPGDLAVRKDGRTVGCKSGCVAYNNDQECCRGAFGTP 189

Query: 233 TRCRKHGGECFSKGYC--SQSLIYEEAS 310
            +CR+       K  C  + S  Y++A+
Sbjct: 190 DKCRQSRTAMLFKDACPTAYSYAYDDAT 217


>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +2

Query: 185 QQKDGIECCYGVSVKETRCRKH--GGECFSKGYCSQSLIYEEASDCPEGNDCCILV 346
           Q+K+G +   G  + E    K   G E   +GY ++ LI E + D P G   CI+V
Sbjct: 98  QKKEGDQLSEGDLLCEIETDKATMGFETPEEGYLAKILIQEGSKDVPIGKLLCIIV 153


>Z68159-2|CAD89732.1|  354|Caenorhabditis elegans Hypothetical
           protein C33D9.3a protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -2

Query: 174 SPVLALISDGQS*ATVHKPPSLRHGSSCSMESISQKSSSLFP*TRMHIAKNNKNFMMT 1
           SP ++  SD  S   V   P     SS S +S S KSS L   TR+  ++ N+N   T
Sbjct: 55  SPTVSPPSDTSSPPNVIGCPETTSFSSTSRKSKSSKSSPLASPTRLVASELNRNVSKT 112


>AF025472-3|AAB71075.2|  843|Caenorhabditis elegans Hypothetical
           protein ZK250.6 protein.
          Length = 843

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 143 NPEPQYTNHLPCGTDPLVRW 84
           N +  YTN+  CG D ++RW
Sbjct: 483 NTKHTYTNNTDCGWDKIIRW 502


>Z30423-10|CAA83014.1|  216|Caenorhabditis elegans Hypothetical
           protein T20G5.12 protein.
          Length = 216

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +2

Query: 134 AQDCPSDIRAKTGLCPKQQKDGIECCYGVSVKETRCRKHGGECFSKGYCSQS 289
           + +CP +   +   C  Q KD  +CC    V  T     G +C +  +C Q+
Sbjct: 120 SSECPIEFLPEMQFCAAQGKDHSQCCSQSQVDATTA---GSKCLT--FCDQT 166


>U88173-9|AAK21384.3|  320|Caenorhabditis elegans Hypothetical
           protein F46F11.7 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = +2

Query: 113 EGGLCTVAQDCPSDIRAKTGLCPKQQKDGIECCYGVSVKETRCRK 247
           EG   ++  DC    +   G C   +  G+ C  G   ++ +C K
Sbjct: 86  EGSARSIVSDCGKHGKCVNGQCILNRCQGVSCDEGSMCRDGKCEK 130


>U41991-7|AAA83347.1|  255|Caenorhabditis elegans Hypothetical
           protein C42D4.3 protein.
          Length = 255

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +2

Query: 143 CPSDIRAKTGLCPKQQKDGIECCYGVSVKETRCRKHGGECFSKGYCSQ 286
           CP    A    C  Q KD   CC   +V  T     G +CF+  +C Q
Sbjct: 120 CPMQAAADIQFCAAQGKDHTACCARNAVGTTLA---GNKCFT--FCDQ 162


>Z68159-3|CAD89733.1|  351|Caenorhabditis elegans Hypothetical
           protein C33D9.3b protein.
          Length = 351

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 20/54 (37%), Positives = 27/54 (50%)
 Frame = -2

Query: 174 SPVLALISDGQS*ATVHKPPSLRHGSSCSMESISQKSSSLFP*TRMHIAKNNKN 13
           SP ++  SD  S   V   P     SS S +S S KSS L   TR+  ++ N+N
Sbjct: 55  SPTVSPPSDTSSPPNVIGCPETTSFSSTSRKSKSSKSSPLASPTRLVASELNRN 108


>AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical
           protein F39C12.4 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 21/70 (30%), Positives = 27/70 (38%)
 Frame = +2

Query: 71  CEIDSIEQEDPCRREGGLCTVAQDCPSDIRAKTGLCPKQQKDGIECCYGVSVKETRCRKH 250
           C    IE E  C  EG  CT  +   S   + + +CP+     + C  G          H
Sbjct: 36  CSSCGIENEGVCISEGRCCTNEECFMSTECSYSAVCPE-----LFCKIG---------HH 81

Query: 251 GGECFSKGYC 280
            G C  KGYC
Sbjct: 82  PGYCMKKGYC 91


>AF025472-1|AAY43980.1|  832|Caenorhabditis elegans Hypothetical
           protein ZK250.5b protein.
          Length = 832

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 143 NPEPQYTNHLPCGTDPLVRW 84
           N E  YT+   CG D ++RW
Sbjct: 157 NTEHTYTDETDCGWDKIIRW 176


>Z81547-3|CAB04461.1|  253|Caenorhabditis elegans Hypothetical
           protein F53F8.4 protein.
          Length = 253

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 143 CPSDIRAKTGLCPKQQKDGIECCYGVSVKETRCRKHGGECFSKGYCSQSL 292
           CP D   +   C  Q +D  +CC    V  T     G +C S  +C Q L
Sbjct: 174 CPLDAMKEMQFCAAQGRDHRDCCARNGVTTTLA---GPKCLS--FCDQRL 218


>AL110482-6|CAB60339.1|  179|Caenorhabditis elegans Hypothetical
           protein Y39G8B.7 protein.
          Length = 179

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +2

Query: 176 CPKQQKDGI--ECCYGVSVKETRCRKHGGECFSKGYCSQSLIYEE 304
           C    K G    CCY    +E  C K  G C S G C +   +E+
Sbjct: 124 CASWAKRGFCTNCCYSCQDRERYCAKTCGFC-SAGTCKECNSFEK 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,146,506
Number of Sequences: 27780
Number of extensions: 199538
Number of successful extensions: 628
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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