BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313C10f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical pr... 251 3e-67 Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical pr... 51 6e-07 AC084196-2|AAK39622.1| 355|Caenorhabditis elegans Hypothetical ... 30 0.87 AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 28 4.7 AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 28 4.7 Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 27 6.2 >Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical protein F28D1.7 protein. Length = 143 Score = 251 bits (614), Expect = 3e-67 Identities = 113/135 (83%), Positives = 125/135 (92%) Frame = -2 Query: 514 TARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRK 335 TARK HR+EQRW DK +KKAH+GT+WK+NPFGGASHAKGIVLEK+GVEAKQPNSAIRK Sbjct: 9 TARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAKQPNSAIRK 68 Query: 334 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANV 155 CVRVQLIKNGKK+TAFVP DGCLN +EENDEVLV+GFGR GHAVGDIPGVRFK+VKVAN Sbjct: 69 CVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANT 128 Query: 154 SLLALYKEKKERPRS 110 SL+AL+K KKERPRS Sbjct: 129 SLIALFKGKKERPRS 143 >Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical protein T03D8.2 protein. Length = 157 Score = 50.8 bits (116), Expect = 6e-07 Identities = 30/66 (45%), Positives = 43/66 (65%) Frame = -2 Query: 412 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 233 G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VLV Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128 Query: 232 AGFGRK 215 G GR+ Sbjct: 129 KG-GRR 133 >AC084196-2|AAK39622.1| 355|Caenorhabditis elegans Hypothetical protein Y55D5A.3 protein. Length = 355 Score = 30.3 bits (65), Expect = 0.87 Identities = 25/98 (25%), Positives = 38/98 (38%) Frame = +2 Query: 194 NVTDGVTFTTESRH*YXXXXXXXXXATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYT 373 N+T V F Y +TG G + LN Y+ A+ D L+ FYT Sbjct: 150 NITIHVDFVRNGTIQYSGLTFALYNGVLTGQRPGEYSVSLNARYSGAYIDNI--LMEFYT 207 Query: 374 NFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFT 487 F + +R E + T+ ++ F R LF+ Sbjct: 208 KFKRPVSFFIRDVLENQA----TYTEAVDAFSRTHLFS 241 >AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical protein Y59A8B.9 protein. Length = 187 Score = 27.9 bits (59), Expect = 4.7 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 174 TLKRTPGMSPTA*PLRPNPATSTSS 248 T RTP +P A P RP P+ S+++ Sbjct: 38 TTMRTPAATPAAPPTRPTPSRSSAA 62 >AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical protein Y59A8B.7 protein. Length = 316 Score = 27.9 bits (59), Expect = 4.7 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 174 TLKRTPGMSPTA*PLRPNPATSTSS 248 T RTP +P A P RP P+ S+++ Sbjct: 167 TTMRTPAATPAAPPTRPTPSRSSAA 191 >Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical protein T23D8.9a protein. Length = 811 Score = 27.5 bits (58), Expect = 6.2 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 Query: 295 TAFVPRDGCLNHIEEN 248 T FVP+DG LN I+EN Sbjct: 653 TPFVPKDGVLNVIDEN 668 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,751,338 Number of Sequences: 27780 Number of extensions: 273503 Number of successful extensions: 686 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 649 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 684 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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