Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313C08f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 52 2e-07
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 51 6e-07
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 48 6e-06
05_01_0103 + 686770-687017,687120-687270 46 2e-05
03_06_0479 + 34217170-34217172,34217337-34217786 41 5e-04
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 41 5e-04
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 40 0.002
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 38 0.005
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 30 1.3
08_02_1170 + 24876197-24877070,24877563-24877606,24877805-248779... 29 2.3
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 29 3.0
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 27 6.9
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 27 6.9
02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237 27 6.9
01_06_1522 - 37962431-37963060,37963216-37963542 27 6.9
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 27 9.1
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 27 9.1
10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569 27 9.1
07_03_1503 + 27017933-27018063,27019668-27019727,27019996-270201... 27 9.1
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 27 9.1
02_01_0695 - 5202091-5202498,5204103-5204588 27 9.1
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = -2
Query: 517 PDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLR 374
PD AKV+ KMLY+SS + KK L G+Q +QATD E S +A++++++
Sbjct: 111 PDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDRVK 158
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = -2
Query: 517 PDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 380
PDT++V+ KMLY+SS D K+ L G+Q +QATD SE S + V+ +
Sbjct: 111 PDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSR 156
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 47.6 bits (108), Expect = 6e-06
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = -2
Query: 517 PDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 380
PDTA+ + KMLY+SS D ++ L G+Q IQATD SE S + + +
Sbjct: 98 PDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRAR 143
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = -2
Query: 517 PDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAV 389
PDT++V+ KM+Y+SS D K+ L G+Q +QATD +E + +
Sbjct: 85 PDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVI 127
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = -2
Query: 517 PDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEE 383
P A V+ KM+Y+SS + KK L GVQ +QATD SE + + +++
Sbjct: 103 PAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKD 147
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = -2
Query: 517 PDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQ 398
P T++++ KMLYS+S D +K+ L G IQATD +E Q
Sbjct: 98 PSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTETPQ 137
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = -2
Query: 517 PDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 380
P ++++ KMLY++S + ++ L GV IQATD SE E + E+
Sbjct: 98 PSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRER 143
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -2
Query: 517 PDTAKVKKKMLYSSSFDALKKSLVGVQ 437
PDT+KV+ KMLY+SS D K+ L G+Q
Sbjct: 356 PDTSKVRSKMLYASSKDRFKRELDGIQ 382
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 113 AAPPFKPKRITASRQK*AGGGGTYP 187
A PP +PKR+ R+K AGG G P
Sbjct: 82 APPPPQPKRLQGGRKKGAGGHGKLP 106
>08_02_1170 +
24876197-24877070,24877563-24877606,24877805-24877900,
24877999-24878544
Length = 519
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 153 REAVMRFGLKGGAAVVTIWVAHLCCRCL*LPVTT 52
R +++ G+ G A+V++W+ + C + +PV T
Sbjct: 140 RPSLLLLGVTGTTALVSMWIHNTACTVMMMPVAT 173
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 464 SEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 348
+E R E P R G+ +GGRRR+A +R + I
Sbjct: 5 AESCGSRGGESPPPPRTRGASAGGRRRKAEAYREVLRRI 43
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = -1
Query: 470 RRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSCPDD 291
R +E V RS HPS R G + R RH S + Y R + +L D
Sbjct: 644 RAAEGVRHRSRTPHPSGRQRAHGDGRQGRSQTRHSSRCSCRYRSRRTRSPSSLTPRDQDG 703
Query: 290 T 288
T
Sbjct: 704 T 704
>05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 361 GDRWRGAS--LRRPPETLPRGRSLGCTSELRQGTFSERR 471
GD+W A + P PR + +S++++ FSERR
Sbjct: 971 GDQWMKADDVVEETPRMAPRAKRSAYSSDVQEVDFSERR 1009
>02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237
Length = 572
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 318 GFGFVASSCVNAVYWRSVARSFSS 389
GFG V VNAV+W S+AR SS
Sbjct: 257 GFGIVFGG-VNAVFWSSLARVSSS 279
>01_06_1522 - 37962431-37963060,37963216-37963542
Length = 318
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 18 MVGRAHSPPGVKWLLEAID 74
+VG+ H PPG +WL E +D
Sbjct: 44 LVGQLHLPPGGRWLDEYMD 62
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 475 SFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 377
S+DALKKS+ G+ + AT++ E E L
Sbjct: 236 SWDALKKSINGLVNKVNATNIKNIVPELFAENL 268
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 392 RRREAPRHRSPINSIYTRARDETEPALRHSCPDD 291
R R A R RSP +R + P+ RH C D
Sbjct: 358 RHRRAMRSRSPSKRRRHGSRGRSPPSSRHGCAKD 391
>10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569
Length = 474
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 515 RHRQGQEEDVVL*-LVRRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTR 339
R + EE+ +L L RRSE+ R + D G ++GGR PR R + R
Sbjct: 76 RKEEAMEEEYLLGRLGRRSEERAARRARRPGQDGGAGGLAGGRLGGLPRPRGGRLLLVPR 135
Query: 338 AR 333
+R
Sbjct: 136 SR 137
>07_03_1503 + 27017933-27018063,27019668-27019727,27019996-27020101,
27020254-27020325,27021008-27021061,27021707-27021856,
27022206-27022547,27022651-27024684,27024706-27024947,
27025658-27026235,27026329-27028183,27028533-27028851,
27028980-27029417
Length = 2126
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/80 (25%), Positives = 32/80 (40%)
Frame = -1
Query: 506 QGQEEDVVL*LVRRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDE 327
Q EED+ VR+ K+ S + P+ +P+ S GR + + +S +R
Sbjct: 846 QSDEEDIWW--VRKGTKLH-ESLKAEPAQKPIKQNSRGRAKVVRKTQSLAQLASSRIEGS 902
Query: 326 TEPALRHSCPDDTRPRHH*P 267
+ H C HH P
Sbjct: 903 QGASTSHLCESKVGCSHHKP 922
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 520 CPDTAKVKKKMLYSSSFDALKKSLV---GVQKYIQATDLSEASQEAVEEKLR 374
C D A + +L +S DA K+L QK+IQATD +E ++E+ R
Sbjct: 1789 CAD-ASISTLILENSLVDARDKNLALFNECQKFIQATDSAEVLIAQLKEEAR 1839
>02_01_0695 - 5202091-5202498,5204103-5204588
Length = 297
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 122 PFKPKRITASRQK*AGGGGTYP 187
PF P + A++ K AGGGG P
Sbjct: 203 PFYPTKANAAQSKAAGGGGCRP 224
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,777,157
Number of Sequences: 37544
Number of extensions: 355059
Number of successful extensions: 1168
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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