Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313C06f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    29   0.095
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    29   0.13 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.50 
AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione S-tran...    25   1.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   1.2  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   2.7  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 29.1 bits (62), Expect = 0.095
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +1

Query: 19  YQCGMCSMISETLDKLEIHCELNHNIKVTDTMKCDVCKEDVSVAIQHIHMKQ-HKDEYKR 195
           ++C +C    +TL  L+ H   +   K      CD C       I+HI  +  H+  +K 
Sbjct: 155 HKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKC 214

Query: 196 KRRKVGKIECNICKKYI 246
                  +E +  K++I
Sbjct: 215 TECDYASVELSKLKRHI 231


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +1

Query: 1   NYHIE---QYQCGMCSMISETLDKLEIHCELNHNIKVTDTMK 117
           +YH+    +++C +C       D L  HC+  H +   DT K
Sbjct: 515 HYHVHFPGRFECPLCRATYTRSDNLRTHCKFKHPMFNPDTRK 556


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +1

Query: 22   QCGMCSMISETLDKLEIHCE--LNHNIKVTDTMKCDV-CKEDVSVAIQH 159
            +C  C    ET+D +  HC       +++ ++ + +V C   V V +QH
Sbjct: 970  RCPACKDEDETVDHVMFHCPRFAEERLQLNESCRVEVGCSNLVQVMLQH 1018


>AF515525-1|AAM61892.1|  235|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 235

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +1

Query: 172 QHK-DEYKRKRRKVGKIEC 225
           QHK DEY+R+  + GK+ C
Sbjct: 41  QHKTDEYRRQVNRYGKVPC 59


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1009

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/61 (21%), Positives = 27/61 (44%)
 Frame = +1

Query: 28   GMCSMISETLDKLEIHCELNHNIKVTDTMKCDVCKEDVSVAIQHIHMKQHKDEYKRKRRK 207
            G+   +S+ L     +    H +++T +  CD C+E         H  +H++   R + +
Sbjct: 884  GVDFFLSQFLSSHGFYAYQLHRMQLTGSPLCDACEEPEDAEHTIFHCVRHRELIIRLQHQ 943

Query: 208  V 210
            V
Sbjct: 944  V 944


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +1

Query: 1    NYHIEQ-YQCGMCSMISETLDKLEIHCELNH 90
            N H  Q ++C +C       D ++ HC++ H
Sbjct: 916  NIHRPQSHECPVCGQKFTRRDNMKAHCKVKH 946


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,872
Number of Sequences: 2352
Number of extensions: 10546
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)