Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313C05f
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           24   0.87 
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   2.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   3.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   4.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.1  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 122 TLRSAYSAPSPHARSESAYHKRSSCDQGAAYHQRS 226
           T   A S+P+P   SES++   SS      YHQ +
Sbjct: 195 TCSEASSSPTPSHSSESSFSAASSY-TNTIYHQEN 228


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 167 ESAYHKRSSCDQGAAYHQRSSGR 235
           E  +H+R  C  G+A  ++++GR
Sbjct: 81  EGFFHEREPCIAGSAPCRKNTGR 103


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 92  RKSHTFQDPRTLRSAYSAP 148
           RK H F+  RT+ + +S P
Sbjct: 47  RKEHIFERIRTIYNQFSTP 65


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 109 KCVTFP*PNGSGSGKGLAR 53
           KC++   P+G G GK + +
Sbjct: 105 KCLSLERPSGGGKGKKMRK 123


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -3

Query: 155 VVMVQSMHFVRYVD 114
           ++   ++HFV Y+D
Sbjct: 207 IISYSTLHFVNYID 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,288
Number of Sequences: 336
Number of extensions: 1961
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)