BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313C05f
(499 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase pr... 26 0.82
AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeo... 24 2.5
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 24 3.3
DQ370049-1|ABD18610.1| 64|Anopheles gambiae putative secreted ... 23 7.6
>Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase
protein.
Length = 250
Score = 25.8 bits (54), Expect = 0.82
Identities = 13/58 (22%), Positives = 24/58 (41%)
Frame = -3
Query: 284 CVXNGXRTRMTNXQCLHDRNFSDDRQLLDHRNFFYDRHFLNVRVVMVQSMHFVRYVDP 111
CV R+R + +HDR + ++ FLNV V + + ++ +P
Sbjct: 51 CVFGSDRSRFSVKFLMHDRTVPKEDSFERKVSYIMTNWFLNVLVFITNDVALLKLSEP 108
>AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeotic
protein protein.
Length = 324
Score = 24.2 bits (50), Expect = 2.5
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 71 WQRVSQAHGDRGSQDEND 18
W++ ++ G+ GS DEND
Sbjct: 299 WKKENKTKGEPGSGDEND 316
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.8 bits (49), Expect = 3.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 131 SAYSAPSPHARSESAYHKRSSCDQGAAY 214
S S SP++R+ + + S+ DQ AAY
Sbjct: 76 SPSSVASPNSRASNMSPESSASDQSAAY 103
>DQ370049-1|ABD18610.1| 64|Anopheles gambiae putative secreted
peptide protein.
Length = 64
Score = 22.6 bits (46), Expect = 7.6
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 101 HTFQDPRTLRSAY 139
HT+ DPRT R Y
Sbjct: 26 HTYNDPRTNRIVY 38
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,175
Number of Sequences: 2352
Number of extensions: 8007
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -