Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313C05f
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related prote... 31 2.9
BX957215-1|CAF29506.1| 1162|Homo sapiens hypothetical protein pr... 31 2.9
BX640751-1|CAE45859.1| 590|Homo sapiens hypothetical protein pr... 31 2.9
AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related pro... 31 2.9
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 30 3.9
M31423-1|AAA51962.1| 223|Homo sapiens CDR1 protein. 29 6.8
M16965-1|AAA52472.1| 223|Homo sapiens CDR1 protein. 29 6.8
BC113474-1|AAI13475.1| 262|Homo sapiens cerebellar degeneration... 29 6.8
BC113472-1|AAI13473.1| 262|Homo sapiens cerebellar degeneration... 29 6.8
AL078639-1|CAI42370.1| 262|Homo sapiens cerebellar degeneration... 29 6.8
>L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related protein
protein.
Length = 1462
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 62 PFARARAVWSRK-SHTFQDPRTLRSAYS---APSPHARSESAYHKRSSCDQGAAYHQRSS 229
P +R+R+ SR S ++ R+L S++S +PS + S + Y S C + ++Y SS
Sbjct: 690 PRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISS 749
>BX957215-1|CAF29506.1| 1162|Homo sapiens hypothetical protein
protein.
Length = 1162
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 62 PFARARAVWSRK-SHTFQDPRTLRSAYS---APSPHARSESAYHKRSSCDQGAAYHQRSS 229
P +R+R+ SR S ++ R+L S++S +PS + S + Y S C + ++Y SS
Sbjct: 390 PRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISS 449
>BX640751-1|CAE45859.1| 590|Homo sapiens hypothetical protein
protein.
Length = 590
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 62 PFARARAVWSRK-SHTFQDPRTLRSAYS---APSPHARSESAYHKRSSCDQGAAYHQRSS 229
P +R+R+ SR S ++ R+L S++S +PS + S + Y S C + ++Y SS
Sbjct: 437 PRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISS 496
>AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related
protein protein.
Length = 1462
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 62 PFARARAVWSRK-SHTFQDPRTLRSAYS---APSPHARSESAYHKRSSCDQGAAYHQRSS 229
P +R+R+ SR S ++ R+L S++S +PS + S + Y S C + ++Y SS
Sbjct: 690 PRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISS 749
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = +2
Query: 11 PQNHFRPGCHGRHEPG*PFARARAVWSRKSHTFQDPRTLRSAYSAPSPHARSESAYHKRS 190
PQ P CH RA SR++H+ + L S + SPH+RS S H RS
Sbjct: 67 PQKSHSPLCHSWSRNRLAHGSTRACSSRRAHSSWS-QNLHS--QSHSPHSRSHSP-HSRS 122
Query: 191 SCDQGAAYHQRSS 229
++ RSS
Sbjct: 123 HSPHSWSHSLRSS 135
>M31423-1|AAA51962.1| 223|Homo sapiens CDR1 protein.
Length = 223
Score = 29.5 bits (63), Expect = 6.8
Identities = 6/25 (24%), Positives = 23/25 (92%)
Frame = +3
Query: 162 VQKVPIIKEVPVIKELPIIREVPVV 236
++ VP+++++P+++++P++ +VP++
Sbjct: 10 LEDVPLLEDIPLLEDVPLLEDVPLL 34
>M16965-1|AAA52472.1| 223|Homo sapiens CDR1 protein.
Length = 223
Score = 29.5 bits (63), Expect = 6.8
Identities = 6/25 (24%), Positives = 23/25 (92%)
Frame = +3
Query: 162 VQKVPIIKEVPVIKELPIIREVPVV 236
++ VP+++++P+++++P++ +VP++
Sbjct: 10 LEDVPLLEDIPLLEDVPLLEDVPLL 34
>BC113474-1|AAI13475.1| 262|Homo sapiens cerebellar
degeneration-related protein 1, 34kDa protein.
Length = 262
Score = 29.5 bits (63), Expect = 6.8
Identities = 6/25 (24%), Positives = 23/25 (92%)
Frame = +3
Query: 162 VQKVPIIKEVPVIKELPIIREVPVV 236
++ VP+++++P+++++P++ +VP++
Sbjct: 10 LEDVPLLEDIPLLEDVPLLEDVPLL 34
>BC113472-1|AAI13473.1| 262|Homo sapiens cerebellar
degeneration-related protein 1, 34kDa protein.
Length = 262
Score = 29.5 bits (63), Expect = 6.8
Identities = 6/25 (24%), Positives = 23/25 (92%)
Frame = +3
Query: 162 VQKVPIIKEVPVIKELPIIREVPVV 236
++ VP+++++P+++++P++ +VP++
Sbjct: 10 LEDVPLLEDIPLLEDVPLLEDVPLL 34
>AL078639-1|CAI42370.1| 262|Homo sapiens cerebellar
degeneration-related protein 1, 34kDa protein.
Length = 262
Score = 29.5 bits (63), Expect = 6.8
Identities = 6/25 (24%), Positives = 23/25 (92%)
Frame = +3
Query: 162 VQKVPIIKEVPVIKELPIIREVPVV 236
++ VP+++++P+++++P++ +VP++
Sbjct: 10 LEDVPLLEDIPLLEDVPLLEDVPLL 34
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,161,746
Number of Sequences: 237096
Number of extensions: 1327343
Number of successful extensions: 9987
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9974
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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