Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313C05f
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical pr...    31   0.61 
Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical pr...    31   0.61 
U88180-1|AAB42294.1|  203|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U23453-4|AAC46756.2|  564|Caenorhabditis elegans Acid sphingomye...    27   5.7  
U88170-2|AAB42250.1|  203|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AF024492-3|AAF98619.1|  918|Caenorhabditis elegans Hypothetical ...    27   10.0 

>Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +2

Query: 71  RARAVWSRKSHTFQDPRTLRSAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGR 235
           R+R   SR+S + + PR+ RS  S  S ++ SES     SS  + ++Y  RS  R
Sbjct: 233 RSRERTSRRSRSKESPRSKRSRRSRSSSNSSSES----DSSSSRSSSYSSRSRSR 283


>Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +2

Query: 71  RARAVWSRKSHTFQDPRTLRSAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGR 235
           R+R   SR+S + + PR+ RS  S  S ++ SES     SS  + ++Y  RS  R
Sbjct: 233 RSRERTSRRSRSKESPRSKRSRRSRSSSNSSSES----DSSSSRSSSYSSRSRSR 283


>U88180-1|AAB42294.1|  203|Caenorhabditis elegans Hypothetical
           protein T27A3.4 protein.
          Length = 203

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 18/68 (26%), Positives = 26/68 (38%)
 Frame = +2

Query: 32  GCHGRHEPG*PFARARAVWSRKSHTFQDPRTLRSAYSAPSPHARSESAYHKRSSCDQGAA 211
           G       G P +R  +V S  +HT + P  +     +PSP  R  S     S      +
Sbjct: 44  GARQSRSVGRPMSRRNSVRSISTHTAKSPSLVLVISGSPSPRRRRPSTRRSSSRRSVVRS 103

Query: 212 YHQRSSGR 235
             + S GR
Sbjct: 104 VSRGSKGR 111


>U23453-4|AAC46756.2|  564|Caenorhabditis elegans Acid
           sphingomyelinase protein 1 protein.
          Length = 564

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 9/30 (30%), Positives = 21/30 (70%)
 Frame = -1

Query: 448 LDWKMNFHEHVSLVXNXNXL*RSSFLNTPL 359
           +DW+ +  EH+S++   + L +++F +TP+
Sbjct: 239 VDWEYSIEEHLSVLRKLHRLVQNTFPSTPI 268


>U88170-2|AAB42250.1|  203|Caenorhabditis elegans Hypothetical
           protein C10G11.9 protein.
          Length = 203

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +2

Query: 32  GCHGRHEPG*PFARARAVWSRKSHTFQDPRTLRSAYSAPSPHARSESAYHKRSS 193
           G       G P +R  +V S  +HT + P  +     +PSP  R  S   +RSS
Sbjct: 44  GARQSRSVGRPMSRRNSVRSISTHTAKSPSLVLVISGSPSPRRRRPST--RRSS 95


>AF024492-3|AAF98619.1|  918|Caenorhabditis elegans Hypothetical
           protein F14F9.4 protein.
          Length = 918

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 160 CVW*WCRVCTS*GTWILKCVTF 95
           C + WCR C     W LKC  F
Sbjct: 663 CGYSWCRQCNKVPHWPLKCGDF 684


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,668,380
Number of Sequences: 27780
Number of extensions: 194083
Number of successful extensions: 464
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)