Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313C04f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q14VP9 Cluster: ORF59; n=1; Ranid herpesvirus 1|Rep: OR...    32   6.9  
UniRef50_Q1RS72 Cluster: Polyketide synthase; n=6; Bacteria|Rep:...    32   6.9  
UniRef50_A0E5D4 Cluster: Chromosome undetermined scaffold_79, wh...    32   6.9  
UniRef50_Q89PB1 Cluster: ABC transporter ATP-binding protein; n=...    32   9.2  

>UniRef50_Q14VP9 Cluster: ORF59; n=1; Ranid herpesvirus 1|Rep: ORF59
           - Ranid herpesvirus 1 (Lucke tumor herpesvirus)
          Length = 382

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 21/73 (28%), Positives = 35/73 (47%)
 Frame = +2

Query: 215 SANLRNALPLIITQIYEFSRVDFPYRMLFLYYESRSRKSVMYLFNLKNW*LPALYEYQHS 394
           SA    A+  ++ + Y  S V   +R LF Y +     S+    N++   L +L   +HS
Sbjct: 133 SAPSPRAIKWMLPETYRTSHVHRFHRQLFQYTKQFVTDSLTSSVNVEARLLQSLLARRHS 192

Query: 395 QYQLIHVHRIVLW 433
           +  L ++ RI LW
Sbjct: 193 RTPLAYIPRIALW 205


>UniRef50_Q1RS72 Cluster: Polyketide synthase; n=6; Bacteria|Rep:
            Polyketide synthase - Bacillus amyloliquefaciens
          Length = 4475

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 105  RHEVEISTVLLHIGCPNLFGLECFTAEIGGMAGTCRLVRTYEMPYH*LLRKFTNF 269
            RHEV+I    + +G  ++ GLE   A        C + + Y+ P    +R+F +F
Sbjct: 2725 RHEVDIDEAFIDLGMDSITGLEWIKAVNKRYGTDCNVTKVYDYP---TIRQFADF 2776


>UniRef50_A0E5D4 Cluster: Chromosome undetermined scaffold_79, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_79,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 603

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +2

Query: 152 QSLRTGMFHGRNRRDGRHLQVSAN--LRNA-LPLIITQIYEFSRVDFPYRMLFLYYESRS 322
           Q LR  +F  R+R + R +Q  ++  L NA   L  TQI   +     Y  + L+YE +S
Sbjct: 436 QLLRQEIFEMRDRLEQRQMQEDSHNMLSNAEKALFETQIQNLNDKIKDYEQMLLHYEQKS 495

Query: 323 RKSV 334
           R+S+
Sbjct: 496 RQSI 499


>UniRef50_Q89PB1 Cluster: ABC transporter ATP-binding protein; n=10;
           Proteobacteria|Rep: ABC transporter ATP-binding protein
           - Bradyrhizobium japonicum
          Length = 342

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 63  PLTSPSR*VPAPSLRHEVEISTVLLHI 143
           PL SP+R VP P +R  VE +  LLHI
Sbjct: 99  PLRSPARRVPEPIIRKRVEQTAELLHI 125


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,759,213
Number of Sequences: 1657284
Number of extensions: 10958525
Number of successful extensions: 22430
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22426
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)